LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci311g0005	ATGGCCGGCGTGTCCGTGTCGGATACGTATCCAACACGGACACGCATTCAGGACGGGGGAACGGCGTGTCCCTTTTCCCAGTTTCCGGCTGACGAGGGCGGATGCGGGTCGAGACGGGCAGAAGCGGGTTGGACGCGGGCAGACGCGATTTTTTTGCGTTTTTCAGTTCCTTTTACTCAGTCCCAACTCCAAAAATCCGATGCCCTAACATTTTCAGCTCCAATCGACCCCCCTTCTCATGTTTTCTGCTGTAGCTTCACCGCCTGTGCTTCTAATTCTCGTTCTTCATCTCTCACGTTTATTCATGGTTCACGCTGCGTCGCTGCCTCACCCGCTCTGCTCTGCCTCTACCTATTCACAATTCACGTTGATTCTCGACCATCTGCTCTGCCTCTACCTCACCGTCGTTCTTCAGCTTCATTGGTAATTTATTCTGTATGGGAGCTGCTAGCTCCAGTGGTACGGTGTTTCCCGGCGAGAACGACCACACTGTGGAACCAGGTGGTGATAATTGGGTTAAAGGGGAATGATGCAGGATCTGTAGCGCGTGAGGAGAACGCGCCACCTAGATGTAGGAATTACCGAGGCGTGAGGCGTCGGCCGTGGGGAAAGTTCTCTGCGGAGATCCGGGAACCGCAGAAGAACGGGGCAAGGACATGGCTTGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTGGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGCCACCGCCGGAGCCGGCAAGAGTGGTCATTAGAGACAAGCGGTGCAGCTCGCTGGAACTTTCGTCGCCGTCTAACTGTACATCCGAGGATGATGGATCTCAAGGGTCAAGTAAGAAGATAAGCCTGGCCGGTCTATTGAACAAGTTAGCAACAAATGGAAGCCACGTCGGATTCCGTTGA	951	0.5363	MAGVSVSDTYPTRTRIQDGGTACPFSQFPADEGGCGSRRAEAGWTRADAIFLRFSVPFTQSQLQKSDALTFSAPIDPPSHVFCCSFTACASNSRSSSLTFIHGSRCVAASPALLCLYLFTIHVDSRPSALPLPHRRSSASLVIYSVWELLAPVVRCFPARTTTLWNQVVIIGLKGNDAGSVAREENAPPRCRNYRGVRRRPWGKFSAEIREPQKNGARTWLGTYESEEDAALAYDRAAFKMRGGKAKLNFPHLIGSEPPPEPARVVIRDKRCSSLELSSPSNCTSEDDGSQGSSKKISLAGLLNKLATNGSHVGFR	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci311g0005	316	PANTHER	DNA-BINDING DOMAIN	172	279	IPR044808	GO:0003700\|GO:0009873
	Prci311g0005	316	SMART	rav1_2	193	257	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	Gene3D	AP2/ERF domain	192	252	IPR036955	GO:0003700\|GO:0006355
	Prci311g0005	316	PRINTS	Ethylene responsive element binding protein signature	233	253	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	PRINTS	Ethylene responsive element binding protein signature	194	205	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	Pfam	AP2 domain	193	243	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	CDD	AP2	193	253	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	ProSiteProfiles	AP2/ERF domain profile.	193	251	IPR001471	GO:0003700\|GO:0006355
	Prci311g0005	316	FunFam	Ethylene-responsive transcription factor 2	192	252	-	-
	Prci311g0005	316	SUPERFAMILY	DNA-binding domain	193	252	IPR016177	GO:0003677

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci311g0005	184	256	AP2-EREBP Transcription Factor Family	AT2G44840	68.235	9.58e-35	124

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Prci311g0005		AP2	3.5e-13	CL0081

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci311g0005	K09286		-	pcin:129296372	646.736