Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci311g0004 ATGTCATTTTCGGGCGGGAATAATGACGACGGTTTGAATTCAGGTGGCTATGACCATGATAACGTTACTGGTGATAACACAGGATCTGTGGCGTGTGAAAAGAACGCGCCATCTCGATGGAGCAATTACCGAGGAGTGAGGCGGCGGCCATGGGGGAAGTTCGCAGCGGAGATCCGGGACCCGAAGAGGAAAGCAAGGAAATGGCTCGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAAGCTCAATTTCCCAAACCTTATTGGATCAGAGCCGCCGCCGGAGCCGGCAAGAGTAGTCATTGGAGAGAAGCGGGGCAGCTCGCCGGAACCTTCGTCGCCGTCATCTCAAGGGTCAAGTAAGAAGAGCCTTGCTGGCCTATTGAACAAGTTAGCAACAAATAGAAGCCATATCAGATTCTGTTGA 468 0.5192 MSFSGGNNDDGLNSGGYDHDNVTGDNTGSVACEKNAPSRWSNYRGVRRRPWGKFAAEIRDPKRKARKWLGTYESEEDAALAYDRAAFKMHGRKAKLNFPNLIGSEPPPEPARVVIGEKRGSSPEPSSPSSQGSSKKSLAGLLNKLATNRSHIRFC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci311g0004 155 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 PRINTS Ethylene responsive element binding protein signature 81 101 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 MobiDBLite consensus disorder prediction 19 34 - -
Prci311g0004 155 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Prci311g0004 155 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Prci311g0004 155 MobiDBLite consensus disorder prediction 1 34 - -
Prci311g0004 155 MobiDBLite consensus disorder prediction 122 144 - -
Prci311g0004 155 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 MobiDBLite consensus disorder prediction 98 144 - -
Prci311g0004 155 PANTHER DNA-BINDING DOMAIN 30 135 IPR044808 GO:0003700|GO:0009873
Prci311g0004 155 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Prci311g0004 155 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci311g0004 42 136 AP2-EREBP Transcription Factor Family AT2G44840 64.583 1.66e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci311g0004 AP2 1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci311g0004 K09286 - pcin:129296372 174.866