Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci311g0003 ATGATCCCTGATCTTTCTTCTTCTTTAGATTCAGTTCATCAATACCTTCTTGAAGATCATGATCCTTCCTCTATGACTCTCATGAATACCTTCTTCATGTTCAACAACCCTACTTTAAATTTAAACCCTAACTGCGACCCGGATGCTTCACCAGAGCAGGGTGCTAGTAATGACTCCAGTGGTACGGTGTTTTCCGGCGGCGAGTATGACACCGCTATGAAACAAGGTGATAGGGTTAGTGTTAACAATGCAGGATCTGTGGCGGGTGAATGTAAGGCGCCACCAAGATGGAGGAATTACAGAGGTGTGAGGCGGCGGCCATGGGGGAAGTTCGCAGCGGAGATCCGGGATCCCAAGAGGAACGGCGCCAGAACTTGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCGTATGATAGAGCTGCTTTCAAGATGAGAGGTAGAAAAGCAAAGCTCAATTTTCCTCACCTCATTGGATCGGAACCGCCACCGGAGCTGGCAAGAGTAGTCGTCGGAAAGAAGCGGCACCGCTCACTGGAACCTTCATCACCGTCAAACAGTACATCTGTGGATGACGGATCTCAAGGGTCATGCAAGAGGAAGAACCTGGCTGGGCTATTGAATAAGATAGCAACAAATGGAAACCTAAGTCAGAAGCTTGAAATGATGTTCAAGAAGGCATAG 690 0.4826 MIPDLSSSLDSVHQYLLEDHDPSSMTLMNTFFMFNNPTLNLNPNCDPDASPEQGASNDSSGTVFSGGEYDTAMKQGDRVSVNNAGSVAGECKAPPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYEREEDAALAYDRAAFKMRGRKAKLNFPHLIGSEPPPELARVVVGKKRHRSLEPSSPSNSTSVDDGSQGSCKRKNLAGLLNKIATNGNLSQKLEMMFKKA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci311g0003 229 Pfam AP2 domain 99 149 IPR001471 GO:0003700|GO:0006355
Prci311g0003 229 SMART rav1_2 99 163 IPR001471 GO:0003700|GO:0006355
Prci311g0003 229 Gene3D AP2/ERF domain 98 158 IPR036955 GO:0003700|GO:0006355
Prci311g0003 229 PANTHER DNA-BINDING DOMAIN 75 194 IPR044808 GO:0003700|GO:0009873
Prci311g0003 229 PRINTS Ethylene responsive element binding protein signature 139 159 IPR001471 GO:0003700|GO:0006355
Prci311g0003 229 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Prci311g0003 229 MobiDBLite consensus disorder prediction 176 199 - -
Prci311g0003 229 MobiDBLite consensus disorder prediction 183 198 - -
Prci311g0003 229 SUPERFAMILY DNA-binding domain 99 158 IPR016177 GO:0003677
Prci311g0003 229 MobiDBLite consensus disorder prediction 43 69 - -
Prci311g0003 229 CDD AP2 99 159 IPR001471 GO:0003700|GO:0006355
Prci311g0003 229 FunFam Ethylene-responsive transcription factor 2 98 158 - -
Prci311g0003 229 MobiDBLite consensus disorder prediction 43 66 - -
Prci311g0003 229 ProSiteProfiles AP2/ERF domain profile. 99 157 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci311g0003 100 218 AP2-EREBP Transcription Factor Family AT2G44840 57.364 2.01e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci311g0003 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci311g0003 K09286 - pcin:129296372 213.001