LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci310g0006	ATGGCTGCTTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCAGAGTCCGCCCTTAAAGAGGACATCATAGAAAATGGTGAGACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGTGCCGCCTCCGCCGCCGGTCAGAGTCAAATCGTTTTCTCGATTTTTGGATAGGCAGTATGGCAGAGATTGCTCGAAAGCAAGCTCTAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGGTCATCTACTTCGGGCGTTTGTTGTGCGGAATTCATCAATCCATATGGAACTCGCTCCTCATCTCAAACTCACAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGACACAGCACGTGACTACCATGACTTTGACATGCAAAATGAACCATACTTGTATAATGAGAAAGATGATGATGATTTCATGACCCCCAGTTTTGAGGGACCAGAGTTCTTTGGAGGTCAAAGTGAGGATAAGTTCATCCTGACATCAGAAATGGAGAATCAACATGAAAATCTTCTGGAAAATAATTACAAAAGTGAAGCATTCCAAGTGGAGAGAAATGGTGATTGCATGGACAGACTATGCCTTTATAATCGTTCTGATGTAGGAAATGAGAATGTGACTTGTTTAAAAGACTATTGTCATGCTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTAGAGAGGTTGAGAATCCTACCTTTGTCAATAATTGTGATGTTCCATTTAGCAAATACTCTGCAGGTTCAGGAGAGTCTTGTAGTGGGGATCCTGGTAATGACAGCTACCTAAGCTTAAAGGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGATTCTGCTCCAGAGCATTCTATGAACCAAACTTTTGACTTCTATCCTAACAATAATGGCAATAAGGGGTACAAAGCTCCCTATGACTTAACTATCAAAGTTGCTGAAACTGACCTGCCAAATGGACTCACCAGATATAAAGCTAAAGATTGTGGAGAATTCACTGAAGAATGCCTAGATCCAGAAAATGCAGCAGATGGAGAGGATGTTACTGATGATGAGCTATTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGATCTGCTCATTGTGCTGAATTCAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTGGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCTGACAGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTGGATGAAATTAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATGAACACCACATATTGCGACTTTATGATTATTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAGTTTCAAAAATACAATCAAGAATCTGGTGGTGAGGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGTGACCTGAAGCCAGAAAATATTCTTATTAGAAGTTACAAAAGATGTGAGATTAAAATTATTGATCTAGGTAGCAGTTGCTTCCAATCAGACAATTTATGCCTCTATGTACAGTCACGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTACAATAATTCTTGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTGAGGGGGCAGGAAACATGCAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAAACCAATTGGAGTACATAATTCCAGAGGAATGGTCCTTGGAGCAGCACCTGCAGGTTTCTGACACGATGTTTATTGACTTTGTCAGATTCTTGCTCAGCACCAATCCCATAAGGCGACCAACTGCAAGACAGGCACTCAAGCATCCATGGCTTGCACATGCTTATGACTCCCAGTAG	2169	0.4103	MAASDVGAVLEFLRNNGFTEAESALKEDIIENGETGSFDYEKFFFPMVPPPPPVRVKSFSRFLDRQYGRDCSKASSKSSDDEFVSLGSSTSGVCCAEFINPYGTRSSSQTHKDSESSSDRLSQFDTARDYHDFDMQNEPYLYNEKDDDDFMTPSFEGPEFFGGQSEDKFILTSEMENQHENLLENNYKSEAFQVERNGDCMDRLCLYNRSDVGNENVTCLKDYCHADKKEQLEGGLVREVENPTFVNNCDVPFSKYSAGSGESCSGDPGNDSYLSLKEIHLNDLHLKVVGDSSSTDSAPEHSMNQTFDFYPNNNGNKGYKAPYDLTIKVAETDLPNGLTRYKAKDCGEFTEECLDPENAADGEDVTDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLLIVLNSVIGGRYYVTEYLGSAAFSKVVQAHDLLTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIIHCDLKPENILIRSYKRCEIKIIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVTIILARMIGMLGPIDLEMLVRGQETCKYFTKEYDIYHVNEETNQLEYIIPEEWSLEQHLQVSDTMFIDFVRFLLSTNPIRRPTARQALKHPWLAHAYDSQ	722

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci310g0006	722	Gene3D	Phosphorylase Kinase; domain 1	407	494	-	-
	Prci310g0006	722	SMART	serkin_6	413	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci310g0006	722	CDD	PKc_DYRK_like	413	715	-	-
	Prci310g0006	722	Gene3D	Transferase(Phosphotransferase) domain 1	467	715	-	-
	Prci310g0006	722	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	108	715	-	-
	Prci310g0006	722	FunFam	Putative serine/threonine-protein kinase dyrk2	407	494	-	-
	Prci310g0006	722	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	539	551	IPR008271	GO:0004672\|GO:0006468
	Prci310g0006	722	FunFam	Serine/threonine-protein kinase ppk15	492	716	-	-
	Prci310g0006	722	Pfam	Protein kinase domain	415	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci310g0006	722	ProSiteProfiles	Protein kinase domain profile.	413	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci310g0006	722	SUPERFAMILY	Protein kinase-like (PK-like)	405	719	IPR011009	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci310g0006	410	710	MAP Kinase Gene Family	AT5G19010	31.776	1.64e-32	131

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Prci310g0006		Pkinase	3.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci310g0006	-		-	gmx:100783988	1058.9