Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci310g0003 ATGGCTGCTTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCAGAGTCCGCCCTTAAAGAGGACATCATAGAAAATGGTGAGACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGTGCCGCCTCCGCCGCCGGTCAGAGTCAAATCGTTTTCTCGATTTTTGGATAGGCAGTATGGCAGAGATTGCTCGAAAGCAAGCTCTAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGGTCATCTACTTCGGGCGTTTGTTGTGCGGAATTCATCAATCCATATGGAACTCGCTCCTCATCTCAAACTCACAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGACACAGCACGTGACTACCATGACTTTGACATGCAAAATGAACCATACTTGTATAATGAGAAAGATGATGATGATTTCATGACCCCCAGTTTTGAGGGACCAGAGTTCTTTGGAGGTCAAAGTGAGGATAAGTTCATCCTGACATCAGAAATGGAGAATCAACATGAAAATCTTCTGGAAAATAATTACAAAAGTGAAGCATTCCAAGTGGAGAGAAATGGTGATTGCATGGACAGACTATGCCTTTATAATCGTTCTGATGTAGGAAATGAGAATGTGACTTGTTTAAAAGACTATTGTCATGCTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTAGAGAGGTTGAGAATCCTACCTTTGTCAATAATTGTGATGTTCCATTTAGCAAATACTCTGCAGGTTCAGGAGAGTCTTGTAGTGGGGATCCTGGTAATGACAGCTACCTAAGCTTAAAGGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGATTCTGCTCCAGAGCATTCTATGAACCAAACTTTTGACTTCTATCCTAACAATAATGGCAATAAGGGGTACAAAGCTCCCTATGACTTAACTATCAAAGTTGCTGAAACTGACCTGCCAAATGGACTCACCAGATATAAAGCTAAAGATTGTGGAGAATTCACTGAAGAATGCCTAGATCCAGAAAATGCAGCAGATGGAGAGGATGTTACTGATGATGAGCTATTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGATCTGCTCATTGTGCTGAATTCAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTGGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCTGACAGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTGGATGAAATTAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATGAACACCACATATTGCGACTTTATGATTATTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAGTTTCAAAAATACAATCAAGAATCTGGTGGTGAGGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGTGACCTGAAGCCAGAAAATATTCTTATTAGAAGTTACAAAAGATGTGAGATTAAAATTATTGATCTAGGTAGCAGTTGCTTCCAATCAGACAATTTATGCCTCTATGTACAGTCACGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTACAATAATTCTTGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTGAGGGGGCAGGAAACATGCAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGATTCTTGCTCAGCACCAATCCCATAAGGCGACCAACTGCAAGACAGGCACTCAAGCATCCATGGCTTGCACATGCTTATGA 2067 0.4078 MAASDVGAVLEFLRNNGFTEAESALKEDIIENGETGSFDYEKFFFPMVPPPPPVRVKSFSRFLDRQYGRDCSKASSKSSDDEFVSLGSSTSGVCCAEFINPYGTRSSSQTHKDSESSSDRLSQFDTARDYHDFDMQNEPYLYNEKDDDDFMTPSFEGPEFFGGQSEDKFILTSEMENQHENLLENNYKSEAFQVERNGDCMDRLCLYNRSDVGNENVTCLKDYCHADKKEQLEGGLVREVENPTFVNNCDVPFSKYSAGSGESCSGDPGNDSYLSLKEIHLNDLHLKVVGDSSSTDSAPEHSMNQTFDFYPNNNGNKGYKAPYDLTIKVAETDLPNGLTRYKAKDCGEFTEECLDPENAADGEDVTDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLLIVLNSVIGGRYYVTEYLGSAAFSKVVQAHDLLTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLHSLGIIHCDLKPENILIRSYKRCEIKIIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVTIILARMIGMLGPIDLEMLVRGQETCKYFTKEYDIYHVNEILAQHQSHKATNCKTGTQASMACTCL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci310g0003 688 SUPERFAMILY Protein kinase-like (PK-like) 405 664 IPR011009 -
Prci310g0003 688 SMART serkin_6 413 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci310g0003 688 PANTHER DUAL SPECIFICITY PROTEIN KINASE 108 665 - -
Prci310g0003 688 CDD PKc_DYRK_like 413 647 - -
Prci310g0003 688 Gene3D Transferase(Phosphotransferase) domain 1 467 670 - -
Prci310g0003 688 Pfam Protein kinase domain 415 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci310g0003 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Prci310g0003 688 Gene3D Phosphorylase Kinase; domain 1 407 494 - -
Prci310g0003 688 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Prci310g0003 688 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci310g0003 410 652 MAP Kinase Gene Family AT5G19010 34.221 3.33e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Prci310g0003 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci310g0003 - - gmx:100783988 963.755