Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci30g0003 ATGGCTTCTTCCTCCAATGTGAAACCATGGCTTTGTTTAAGCTTTCTCTTCGTTCTTCACACTTCTCTGCTCGCACCAATCTGTAATTCCCAGCCTCAGAACATCGAAACCTTCTTTCCATCTCAAACTCAACCCCCAGCTTCTGAACCGAGCATTTCTCTACCACCGCCGGTTGTTCCGCCGTCATCAGAAGTACAGCCTGCACCGACGCCGGCGTCGGCGGAAACAACCAGAAGTTCATCATCGAAGGGTAAGGTAGGGAGGGCTGTGGCTATTACTGCAGCAAGCACTCTGGTTGTTTCTGCGTTAGCGTTCTTCTTTGTCAGATGGTGTTTAAAGAAAAGACGTAGAGAAGAGAGACGTGTGAGCTCTGCTTCAGAACCTGGGGATGGAAATGCAAATGGAAGAGATGTGACTCAGACGAACACGTTTGAGCGAATTGAAGGGAATGTGAAGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAAGAAGCTTGAAGGGAGAAATACCTCCAAGAAGGGATTACAGAAGGAGGTTCGAAGCATAGCTAAAGAACAAGATCAAGAACAAGAAGTAGAACAAGTAGAGATAGAAACAGAAACAGAAACAGAAGATGGGTATGGAGGACATCATCGCCGGAAAAAATCTGAGCCTGTTCAAGAAATTCCTCTGCTTCGTGGTAAGTCTTCGGCTTCGGAGAAAAATTTATTATCAGAAGGTGAACATGGGTTGAATCGGAGCTGGAGGAGAAACTTGTCTCGAAAAATAGCTCCTCCGCCTGCGGCGCCGGCGTCAGCGGTGGCGACTGTTTCACCACCGTTACCACCACCACCGGCCGCTTATTTTTCTGCTGTTTCAAAAGCGACGCCGCCGCCTCCACCGCATTCTGCGGCTGCTTCTTCTGCTTCACCACCATTACTACCACCACCTTCTGCTTACTTTTCTGCTGTGAACAAAACGAAAAGCACTGAAACAAAACCACCTCCACCTCCACCTCCACCTCCTCCGGCAATTCCGGATAAAAAGGGTCCGGCACCGCCTCCCCCTCCTCCGCCGGTGCCGGCTAAAAAGAGTCCAGCACCACCACCTGCTCCGCCCGTGGCCGGAAGTTTGAGGTCATCTTCAAAACCACCGCCTACCCCAGTTGAAAAGCCTTCGGGAGAAAGCGATGATAAGAAAGTGAAACTTAAACCTCTGCATTGGGATAAGGTTACCGCTAATGCTGATCATTCCATGGTTTGGGACAAGTTGGATCGTGGCTCCTTCAGGGTTGATCAAGATCTTATGGAAGCTCTATTTGGGTATGTGGCTACAAACAAAAGAACACCAAAAGGGCAAAGCAATTCATCTAGTCCAAGCAAGGAGGTCTCTGCACAATCAAGCACAACTTTCATCCTTGATTCAAGAAAATCCCAGAACTTTGCTATTGTTTTGAGATCTCTAGCTGTGTCGCGACGAGAAATTCTTGATGCCCTTGATGAAGGTCAAGGCCTTAATTCAGATACAATTGAGAAGCTTGTTAGAGTTGCTCCAACCCAAGAAGAGCAATCTGATATCCTTGATTACAGGGGAGACCCAGCAAGACTTGCTGTTGCAGAATCTTTCCTCTATGACATCCTCAGAGCTGTTCCTTCAGCTTTCAAGCGCTTGAATGCTATGCTTTTCAGGTCGAACTATGACACAGAGTTAATGGAGATCAAGGAGTCTCTGAGCACTCTTGAATTGGGCTGCAAGGAGCTTCGAACTCGAGGTCTCTTTGTGAAGCTTCTTGAAGCAGTTCTTAAAGCCGGAAACCGTATGAATGCTGGTACTTCAAGAGGCAATGCTCAAGCTTTCAACTTGTCTTCTTTGAGGAAGCTCTCTGATGTCAAAAGCACAGATGGGAAAACCACATTGCTTCACTTTGTGGTCAAAGAAGTAGTCCGGTCTGAGGGAAAACGCTGCGTTTTTAACCGTGATCACAGCCTGAGTCGCAGCGGAAGTAGGAAAATAAACAGCAAAGGAGACACTGAGAACTCTGTTTCAGAAGAACAAAGAGAAGTGGAATACCTAAGGCTAGGATTACCATTTGTTGGAGGAATCAGTACAGAGTTTTCCAATGTGAAGAAAGCAGCCCTTGTAGATTACAATAGTTTAGTTGCTTCAATCTCATCCCTCTCAACTCGGATAGCTGAAATCAAACAACTTGTTTCCGAGTGTGGGAATGGTAAAGGAGGGAGCTTTGTGAGGGAAATGAACCATTTTCTGAGAAATGCTGAGGAGGAATTGAGATCAGTGAGAGATGAGCAGACAAGGGTAATGCAGATTGTGAAGAAAACAACAGAGTATTATCAAGGAGGAGCTTCAAAAGATAAAGCAGAGAATCTTCTGGAAATATTTGTCATCGTCAAGGATTTTCTGGGAATGGTAGATCAGGCCTGCATCGACATCGCTCGTAACATGCAGAAGAGGAAGACAACAAAAACAAATTCTGGGTAA 2490 0.4618 MASSSNVKPWLCLSFLFVLHTSLLAPICNSQPQNIETFFPSQTQPPASEPSISLPPPVVPPSSEVQPAPTPASAETTRSSSSKGKVGRAVAITAASTLVVSALAFFFVRWCLKKRRREERRVSSASEPGDGNANGRDVTQTNTFERIEGNVKGLIVDENGLDVIYWKKLEGRNTSKKGLQKEVRSIAKEQDQEQEVEQVEIETETETEDGYGGHHRRKKSEPVQEIPLLRGKSSASEKNLLSEGEHGLNRSWRRNLSRKIAPPPAAPASAVATVSPPLPPPPAAYFSAVSKATPPPPPHSAAASSASPPLLPPPSAYFSAVNKTKSTETKPPPPPPPPPPAIPDKKGPAPPPPPPPVPAKKSPAPPPAPPVAGSLRSSSKPPPTPVEKPSGESDDKKVKLKPLHWDKVTANADHSMVWDKLDRGSFRVDQDLMEALFGYVATNKRTPKGQSNSSSPSKEVSAQSSTTFILDSRKSQNFAIVLRSLAVSRREILDALDEGQGLNSDTIEKLVRVAPTQEEQSDILDYRGDPARLAVAESFLYDILRAVPSAFKRLNAMLFRSNYDTELMEIKESLSTLELGCKELRTRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLSSLRKLSDVKSTDGKTTLLHFVVKEVVRSEGKRCVFNRDHSLSRSGSRKINSKGDTENSVSEEQREVEYLRLGLPFVGGISTEFSNVKKAALVDYNSLVASISSLSTRIAEIKQLVSECGNGKGGSFVREMNHFLRNAEEELRSVRDEQTRVMQIVKKTTEYYQGGASKDKAENLLEIFVIVKDFLGMVDQACIDIARNMQKRKTTKTNSG 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci30g0003 829 MobiDBLite consensus disorder prediction 291 315 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 328 372 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 127 144 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 68 86 - -
Prci30g0003 829 PANTHER FORMIN-RELATED 326 819 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci30g0003 829 MobiDBLite consensus disorder prediction 118 144 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 49 67 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 38 86 - -
Prci30g0003 829 Pfam Formin Homology 2 Domain 392 807 IPR015425 -
Prci30g0003 829 Coils Coil 746 773 - -
Prci30g0003 829 ProSiteProfiles Formin homology-2 (FH2) domain profile. 390 829 IPR015425 -
Prci30g0003 829 SMART it6_source 390 822 IPR015425 -
Prci30g0003 829 MobiDBLite consensus disorder prediction 207 225 - -
Prci30g0003 829 SUPERFAMILY Formin homology 2 domain (FH2 domain) 403 823 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 185 402 - -
Prci30g0003 829 MobiDBLite consensus disorder prediction 269 284 - -
Prci30g0003 829 Coils Coil 189 209 - -
Prci30g0003 829 Gene3D Formin, FH2 domain 390 819 IPR042201 -
Prci30g0003 829 MobiDBLite consensus disorder prediction 661 680 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci30g0003 372 823 FH2 protein (formin) Gene Family AT1G70140 59.251 0.0 547