Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci309g0009 AAAGCCAATCAGGAAGATCAACTGGAAGAGCTGATTCTATCCAAGAGATTAAAGAACAAGCTTCTGACAAGTTCTTGGAAGAAAGATGTGTCCAAACAGCAATATTATGTGTCATCCCAAGAAGGGCTAATGCAGAGTGATAAGATTAGTGCATTTCCTGGACAGCCTTATGGAGAATTTAATCAATACTCTGGTTATGTTACAGTTGATCCAAATGCTGGAAGAGCCCTTTTCTATTACTTTGTAGAGTCATATAATCCTTCTACCAAACCACTAGTGTTGTGGCTCAATGGAGGGCCAGGATGTTCTTCATTTGGCTATGCTTTTCAGGAATTGGGACCCTTCAGAGTCAACTCTAATGGAAAAAGTCTATTTCTTAACGAGTATGCTTGGAACAATGTGGCAAATGTGTTGTTCTTGGAATCACCAGCTGGAGTGGGCTTTTCCTACTCAAACACTTCGTCTGATTATGATCAAGCAGGAGATAAGTTTACAGCAAGAGATGCCTATGTGTTCCTCATCAATTGGCTTGAGAGATTTCCACAATACAAATCCAGAGATTTCTTCATCACTGGAGAGAGCTACGCTGGTCATTATGTGCCTCAACTTGCTTACAACATTTTGGTCCAAAATATTTTCTCTGGACAAACCATTATCAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATCGATGATGAAACAAGTTCAGAGGGAATATTCGATTACTTATGGACACATGCTCTAATCTCAGATGAAACCCATTCAAGTATTGATAAGTACTGTGACTTTGCCACTGATAATGTTTCAGGGTGTGTCAGTGCAACGAGAAAGGCCCTTCAGGAGAAAGGGAAGATAGATTGGTACAACATTTACGCTCCACTCTGCCGTGACACTTCACTCAGAAATGGTCCGCCTGGTTCTGTGTACAATTATGATCCATGCTCTGATTACTACGTGGAAGCCTATATGAATAACCCAGACGTCCAGCTAGCTCATGCTCTTCCCACAAACTGGACTCATTGCAAAGATTATAACTGGACAGACAGCCCAAGTACGATCCTTCCCACCATCAAGGATCTCATCAGATTTGGCATTAAAGTGTGGATTTACAGCGGGGACACAGATGGACGGGTACCAGTCACATCGTCTAAGTACTCAATCAACCGTCTCAACTTTCCTGTTGAGGTTCCATGGCGACCATGGTACTCAGGAAATGAGGTAGGAGGATATGTGGAGCAATACAAAGGATTAACGATTGTGACAGTGAGAGGAGCTGGCCACACTGTTCCCAGTTGGCAACCAGCAAGGGCCCTCATCCTCATTACTTCATTCCTCAAGCGCTCTGCGCCTCCGGCTTCACCATGGCCATAG 1374 0.4345 KANQEDQLEELILSKRLKNKLLTSSWKXKDVSKQQYYVSSQEGLMQSDKISAFPGQPYGVXFNQYSGYVTVDPNAGRALFYYFVESXYNPSTKPLVLWLNGGPGCSSFGYGXFQELGPFRVNSNGKSLFLNEYAWNNVANVLFLESPAGVGFSYSNTSSDYDQAGDKFTARDAYVFLINWLERFPQYKSRDFFITGESYAGHYVPQLAYNILVQNIFSGQTIINLKGIAIGNAWIDDETSSEGIFDYLWTHALISDETHSSIDKYCDFATDNVSDXCVSATRKALQEKGKIDWYNIYAPLCRDTSLRNGPPGSVYNYDPCSDYYVEAYMNNPDVQLAXHALPTNWTHCKDYNWTDSPSTILPTIKDLIRFGIKVWIYSGDTDGRVPVTSSKYSINRLNFPVEVPWRPWYSGNEVGGYVEQYKGLTIVTVRGAGHTVPSWQPARALILITSFLKRSAPPASPWP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci309g0009 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Prci309g0009 463 Gene3D - 320 354 - -
Prci309g0009 463 FunFam Carboxypeptidase 44 303 - -
Prci309g0009 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 441 IPR001563 GO:0004185|GO:0006508
Prci309g0009 463 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Prci309g0009 463 Pfam Serine carboxypeptidase 54 453 IPR001563 GO:0004185|GO:0006508
Prci309g0009 463 Gene3D - 360 453 - -
Prci309g0009 463 SUPERFAMILY alpha/beta-Hydrolases 48 453 IPR029058 -
Prci309g0009 463 Gene3D alpha/beta hydrolase 45 303 IPR029058 -
Prci309g0009 463 FunFam Carboxypeptidase 316 456 - -
Prci309g0009 463 FunFam Carboxypeptidase 360 454 - -
Prci309g0009 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Prci309g0009 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Prci309g0009 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Prci309g0009 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci309g0009 371 452 Calmodulin-binding Proteins AT2G22960 36.145 1.27e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci309g0009 K16297 - gmx:100779407 709.138