Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci308g0005 ATGTGTAGTCCTAAAAAGAGAATCCAACCAAAGCCAGACTTCTATCGAGAAACGAAGCATATAGCAGAAACCATGGCTGCTGAGCTTGTGGGTGGAGCGTTTCTCTCTGCTGCTCTCCAAGTTGCATTTGATAGGCTGTCTTCTACTTCTGTCATAACTCACTACTTCCGATCAAGAAAGCTCGAGGATAGCTTGCTCAAAAAGCTTCACATTACCCTCATTGCTGTGAATCAAGTGCTTGATGATGCAGAAGCAAGGCAGTACACTAACCCCAATGTCAAGAAGTGGCTTCATGAGCTCAAACACGCTGTGTATGTCGCTGATGACCTCTTAGATGAGATTGCTACTGAGGCAACCAGGTTGAAGTTCGAAGCTGAGAATCAAACTGCGACCAGTAAGGCACGAGGCTTCTTTACTTTTGTTAATCCATTTGACAAACACGTGGAAGCTAGAATCCAGGAAGTTCTTGACGACCTGGAGTTCCTTGCAAAACAAAAGGATGCTCTCCGATTGAAGGAAGGCTCTGGTGGTGGTTGTGAAATTGGAGTTGGTGGGAGAGTATCAGATAGATTGCCGACTACGTCTCTGGTAGTTGATGATTCCAGTATATATGGTAGAGATGGTGATAAAGAACAAATAATTGAGCTTTTACTTGATGATGATTTGAGTAGGAACCCTCTATCTGTGATTTCTATAGTAGGTATGGGTGGGTTGGGTAAGACCACTCTTGCTCAGCTAGTGTACAATGATGCAAGGATGGAGGATCAGTTTCAACTCAAAGCTTGGGTATGTATCTCAGAAGAATTTGATGTTGTTAGAATTACAAAAACAATACTTTCTGCGCTGGGATGTTCACTAACAAATTATGAAGACCTGAATCAGCTTCAACTAAAACTGAAAGAGAAACTGATGGGGAAGAAATTTTTGCTAGTTCTTGATGATGTCTGGAATGAGCGCCAATCCAATTGGGAAGCCTTGCAAATTCCTTTCTCTTGTGGAGATTTGGGAAGTAAGATCCTGGTCACAACACGCAGTGGAAAAGTAGCGTCCATTGTGGGTTCAATTAGATTGCATCGCATACCTTTACTAAATGAAGAAGATGGGCGGAAGGTATTTGCTGAACGTGCATTCAAAAACAAGGATTCTAGCATGTGTCCAAATCTTGAGTCAATTGGTGAAAAAATTGTTCAAAAGTGCAAAGGATTGCCTTTAGCCATAAAAACATTGGGTGGCCTCCTAAATAAAAAATTATCAGAGAAACACTGGAATGAAATTCTTCATAGTGAGATATGGCAGTTAGATGGTGAGACTGATATAATGCCAGCTTTAAGATTAAGCTACCATTACCTACCTTCTAATTTGAAGAGGTGTTTTGCATTTTGTTCTATATTTCCTAAAGACTACGATATTGACAAGGATTCTCTAATCCAGATGTGGATGGCAGAAGAGTTGTTGCATTGTCATCAAGGGAAAAAAAGTATGAAAGAAATAGGGAATGAAGTCTTGAGTGAATTAAAATCAAGGTCTTTTTTCCAGAACTCGAGATTTGGTCATGACAAGTTAATCATGCATGATCTTTTAAATGATCTAGCAAATTCAATCTCTGATGGATTTTGTTCAAGAGTAGAGGGTGGTAATGTGCAACACATTCAAAGAAAGATCCGCTACTTTTCATGCTCAGACTTTAAAATTGCTTGGATGCAATCAAATTTTTGA 1716 0.3992 MCSPKKRIQPKPDFYRETKHIAETMAAELVGGAFLSAALQVAFDRLSSTSVITHYFRSRKLEDSLLKKLHITLIAVNQVLDDAEARQYTNPNVKKWLHELKHAVYVADDLLDEIATEATRLKFEAENQTATSKARGFFTFVNPFDKHVEARIQEVLDDLEFLAKQKDALRLKEGSGGGCEIGVGGRVSDRLPTTSLVVDDSSIYGRDGDKEQIIELLLDDDLSRNPLSVISIVGMGGLGKTTLAQLVYNDARMEDQFQLKAWVCISEEFDVVRITKTILSALGCSLTNYEDLNQLQLKLKEKLMGKKFLLVLDDVWNERQSNWEALQIPFSCGDLGSKILVTTRSGKVASIVGSIRLHRIPLLNEEDGRKVFAERAFKNKDSSMCPNLESIGEKIVQKCKGLPLAIKTLGGLLNKKLSEKHWNEILHSEIWQLDGETDIMPALRLSYHYLPSNLKRCFAFCSIFPKDYDIDKDSLIQMWMAEELLHCHQGKKSMKEIGNEVLSELKSRSFFQNSRFGHDKLIMHDLLNDLANSISDGFCSRVEGGNVQHIQRKIRYFSCSDFKIAWMQSNF 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci308g0005 571 PANTHER DISEASE RESISTANCE PROTEIN RP 75 541 IPR044974 GO:0006952
Prci308g0005 571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 461 IPR027417 -
Prci308g0005 571 Gene3D - 362 445 IPR042197 -
Prci308g0005 571 Pfam NB-ARC domain 208 427 IPR002182 GO:0043531
Prci308g0005 571 Gene3D - 38 154 - -
Prci308g0005 571 Gene3D - 187 355 IPR027417 -
Prci308g0005 571 FunFam Probable disease resistance protein At1g63360 447 533 - -
Prci308g0005 571 PRINTS Disease resistance protein signature 229 244 - -
Prci308g0005 571 PRINTS Disease resistance protein signature 399 413 - -
Prci308g0005 571 PRINTS Disease resistance protein signature 302 316 - -
Prci308g0005 571 FunFam Probable disease resistance protein At1g61300 188 354 - -
Prci308g0005 571 Pfam Rx N-terminal domain 34 128 IPR041118 -
Prci308g0005 571 Coils Coil 152 172 - -
Prci308g0005 571 Gene3D - 446 533 IPR036388 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci308g0005 222 416 WRKY Transcription Factor Family AT5G45050 28.230 3.18e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci308g0005 - - pcin:129313137 771.541