Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci304g0005 ATGGGACGCGTCCGCACCAAGACTGTCAAGAAGTCTTCGCGCCAGGTCATTGAGAAGTACTACTCTCGGATGACCTTGGATTTCCACACCAACAAGAAGATCCTTGAGGAGGTTGCTCTCATTCCCTCCAAGAGACTCCGCAACAAAATTGCCGGATTCTCGACTCATCTCATGAAGAGGATCCAGAAGGGACCCGTTCGTGGAATCTCTCTCAAGCTTCAGGAGGAGGAGCGTGAGCGTCGCATGGATTTCGTCCCCGACGTCTCCGCCATTAAGACCGATCAGATCGAGGTCGATAAGGAGACTCTAGACATGCTCGCTGCTTTTGGTATGAATGATATTCCGGGGCTCGTCCAAGTTGATCCCGTCCCTGTGCAGCAGACGACGGGATTCGGTCGTGGTTTTGGCGGAGCTAGGAGGTATTAG 426 0.5305 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLAAFGMNDIPGLVQVDPVPVQQTTGFGRGFGGARRY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci304g0005 141 PANTHER 40S RIBOSOMAL PROTEIN S17 1 126 IPR001210 GO:0003735|GO:0005840|GO:0006412
Prci304g0005 141 FunFam 40S ribosomal protein S17 1 62 - -
Prci304g0005 141 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Prci304g0005 141 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Prci304g0005 141 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Prci304g0005 141 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Prci304g0005 141 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci304g0005 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 82.734 9.98e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci304g0005 K02962 - gmx:100527036 223.402