Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3938 ATGGTTTGCTCTCTCAAACAACCTGGTATATCTTTCAGTTCTTCTGATGTTGTTCTTCGGAGAAGACAGTCAAATTCCTTTCAGTCAAGCTCAAGCTTGCTTTTACCTTCAATGCCGAAGGGAAAAGCTGAGCAACCTCTGGTTTCAGTGCACAAACCCTTGCATCTTTCTTCTCTGACTAAGAAATTTTTGAAGGTGAATATTCCGTCAGCGGGTCCACGTGGAAATTCGATCAGATGCGAAGCTTTTGAGGCAGACCGATCAAACATTGAAGCAAGCACGCCATCGGAGGCAGCAAACAGGTTGAGAATTGGAATATATTTCGCAACGTGGTGGGCTCTAAACGTGGTATTCAATATTTATAACAAGAAGGTTCTGAATGCATACCCGTACCCTTGGCTTACTTCAACGCTCTCGCTCGCTTGTGGGTCTCTTATGATGTTGATTTCTTGGGCCACGAGGATCGTGGAGGCGCCAAAGACTGATTTTGAGTTTTGGAAGACTCTGTTTCCGGTTGCTGTTGCTCATACCATCGGACATGTGGCTGCAACGGTTAGTATGTCAAAGGTTGCGGTTTCATTCACACACATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTACTGGTCTCCAGATTTCTTCTGGGTGAGTCCTTCCCAGTACCAGTCTATCTGTCCTTAGTGCCAATCATCGGTGGGTGTGCACTTGCTGCTGTGACGGAGCTCAATTTCAACATGACTGGTTTTATGGGAGCCATGATATCAAATTTGGCATTTGTTTTTCGGAACATCTTTTCAAAACGAGGCATGAAGGGAAAGTCTGTTAGCGGAATGAACTACTATGCTTGTTTGTCTATGTTGTCTCTCTTAATTCTCGCACCATTCGCAGTTGCTGTTGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCCTTTCTCAAATAGGACCCCAGTTTGTATGGTGGGTGGCGGCGCAAAGTGTATTCTATCATCTGTATAATCAGGTATCATACATGTCTTTGGATGAGATCTCTCCCTTGACATTTAGCATTGGGAACACCATGAAACGAATTTCAGTCATAGTCTCCTCAATCATCATCTTCCACACACCAGTTCAGCCCATCAATGCCCTTGGAGCTGCTATCGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1188 0.4545 MVCSLKQPGISFSSSDVVLRRRQSNSFQSSSSLLLPSMPKGKAEQPLVSVHKPLHLSSLTKKFLKVNIPSAGPRGNSIRCEAFEADRSNIEASTPSEAANRLRIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIVEAPKTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMLSLLILAPFAVAVEGPQMWAAGWQTALSQIGPQFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3938 395 Pfam Triose-phosphate Transporter family 102 391 IPR004853 -
Prci2g3938 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Prci2g3938 395 PANTHER SOLUTE CARRIER FAMILY 35 104 394 - -
Prci2g3938 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3938 Prci-Chr2 48326515 48331449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3938 1 394 Antiporters AT5G54800 75.802 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3938 K15283 - gmx:100801832 610.527