Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3932 ATGGGGATTCAGACAATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCCCCATTGACAAGGCAAAGCTCATGGTATAGTCTTACACTTGATGAGGTTAAAAATCAACTAGGAGACCTGGGGAAGCCATTGGGAAGCATGAACCTTGATGAGCTTCTTCAGAATGTATGGACTGCTGAAGCAAACAAATCTATAGGGGTAGAAAATGAGAACCTGTCATCATCATCTTCTCTTCAACGTCAGGCCAGTCTGACCCTGGCCCGGGCTTTGAGTGGGAAGACAGTTGACGATGTATGGAGAGAAATCCGACAAGGTCAGAAGAAACGATTTTCAGAGGATATAAGAGGTCCAGATGGAGAGATGACTCTTGGTGAAACAACCTTGGAGGATTTCTTGGTACAAGCAGGGCTTTTTGCTGAAGCTTCTATTAGTCCCTCGATGGGGTTGGATACTATGGAAGCCATCAACCCACAAAGTCTTCAACATAAGACAGGCTTGTCATCCTCCCCTTCATTTGGCAGTTTATCTGACACAAGACCAGGCCGCAAAAGGGACACTCCAGATGCATATGAGAAAACTTTGGAGAGGAGGCTGAGGAGAAAAATCAAGAACAGGGAATCTGCTGCCCGTTCACGAGCCAGAAAGCAGGCTTACCATAATGAATTGGTTAGCAAGGTTTCTCGTCTAGAAGAAGAAAATACAAAGCTCAAGAAAGAGAAGGAGTTTGAGAAGAGGTTGGCATCTGAATCATCACGTGAACTAACATATCAGCTTCGAAGAACGAGTTCTGCTTCTTTCTGA 810 0.4494 MGIQTMGSQGNGQQSHLQPSPLTRQSSWYSLTLDEVKNQLGDLGKPLGSMNLDELLQNVWTAEANKSIGVENENLSSSSSLQRQASLTLARALSGKTVDDVWREIRQGQKKRFSEDIRGPDGEMTLGETTLEDFLVQAGLFAEASISPSMGLDTMEAINPQSLQHKTGLSSSPSFGSLSDTRPGRKRDTPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENTKLKKEKEFEKRLASESSRELTYQLRRTSSASF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3932 269 MobiDBLite consensus disorder prediction 164 179 - -
Prci2g3932 269 SMART brlzneu 195 263 IPR004827 GO:0003700|GO:0006355
Prci2g3932 269 Coils Coil 222 249 - -
Prci2g3932 269 Pfam bZIP transcription factor 199 244 IPR004827 GO:0003700|GO:0006355
Prci2g3932 269 MobiDBLite consensus disorder prediction 164 219 - -
Prci2g3932 269 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Prci2g3932 269 MobiDBLite consensus disorder prediction 254 269 - -
Prci2g3932 269 MobiDBLite consensus disorder prediction 181 205 - -
Prci2g3932 269 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 197 250 - -
Prci2g3932 269 Gene3D - 197 253 - -
Prci2g3932 269 MobiDBLite consensus disorder prediction 243 269 - -
Prci2g3932 269 MobiDBLite consensus disorder prediction 1 23 - -
Prci2g3932 269 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 267 IPR043452 GO:0003700|GO:0045893
Prci2g3932 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 242 IPR004827 GO:0003700|GO:0006355
Prci2g3932 269 SUPERFAMILY Leucine zipper domain 199 246 IPR046347 GO:0003700|GO:0006355
Prci2g3932 269 CDD bZIP_plant_BZIP46 199 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3932 Prci-Chr2 48256789 48262484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3932 22 269 bZIP Transcription Factor Family AT3G56850 47.018 1.51e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g3932 bZIP_1 4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3932 K14432 - gmx:100798549 405.601