Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3917 ATGTTCCTTTTCCTTCATTTCTATTCGTTTTTATCCTACAAGTCAATTGCTTATCCAGAAGGATATGCGTCGGAGGGCTCTTTGCCGCCGCCGCCACCTCTCCCACCGAATGCTGTACCACTGATAGCAGATCAAGGACATCCTCTTGAACCTGTTAAGAAGGTTTCTCGGGTTCCAATCGCCAGAAGAGGATTGGGATCCAGAGGAAGTAAATTACCTCTTTTAACTAACCACTTCAAAGTCACTGTTAAGAACAACGATGACTATTTCTTCCACTACAGTGTATCATTTTCTTACGAAGATGGACGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGACAGGGTGCAGGAGACTTATGACTGCGAGTTAGCAGGGAAGGATTTCGCCTATGACGGGGAGAAGAGTTTGTTTACTATTGGCCCTCTTCCTCGAAACAAGCTTGAATTCACTATTGTTTTGGAGGATCTCACATCAAACAGGAGTAATGGCAATTGCAGCCCTGATGGTCAAGGGAGTCCGAATGAGAGTGACAAGAAGAGGATGCGACGCCCAAATCGTTCCAAAACATTTAAAGTGGAGATCAGTTATGCTGCTAAGATCCCTATGCAGGCTATCACTAATGCACTGCGTGGTCAAGATTCTGAAAGTTTTCAAGAAGCCATAAGAGTTTTTGATATCATATTAAGGCAACATGCTGCCAAGCATGGTTGTTTACTTGTTCGCCAATCTTATTTCCACAATGATCCAAGGAATTTTGCTGACGTTGGAGGTGGGGTTTTAGGCTGCAGAGGATTCCATTCAAGTTTCAGAACCACACAACGTGGTCTGTCACTTAACATAGATGTATCTACTACCATGACCATACAGCCTGGGCCCGTGGTGGACTTTTTAATTGCCAACCAGCGTGTGCCAAATCCTTATTCAATTGACTGGGCAAAGGCCAAAAGAACGCTTAAAAATCTGAGGATTAAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAGAGAGCAGACGTTTTCTCTTAAAGTCAAAAGTGGAAAGGATGGCAACGATGCTTCAGAGGAAGTGACTGTTTATGATTATTTTGTTAATCATCGTAAAATAGATATCCGTTATTCTGCTGATCTTCCGTGTATCAATGTTGGGAAACCAAAACGTCCTACTTTCTTCCCACTTGAGCTTTGCTCTTTGGTATCCCTACAACGATATACAAAATCACTGTCTACCCTTCAAAGGGCTTCGCTGGTGGAGAAATCTAGGCAGAAGCCCCAAGAGAGGATGAGAGTTTTGTCTGATGCTTTAAAAAGCAACAAGTATGATTCTGAACCCATGCTTCATAATTGTGGGGTTTCAATAAGCAACAGCTTTACCGAGGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGGCCGGGAGGATAACCCAAGAAATGGGAGATGGAACTTGAATAATAAGAAAATGGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCCCGTTGTGATACAAGTGGGCTTGTGCGAGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCAAATAGACAACCCGTTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTAGCCCACCTGTGGCAAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGGGCACCCAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTGTGATCTCTATGGTCCGTGGAAACGGAAGAATCTTTCAGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCCACAAGGGTCAATGACCAATATCTCACTAATGTTCTGATGAAGATCAATGCTAAGCTCGGTGGCCTGAATTCAATGCTATCAATTGAACATACACCATCAATTCCTGTTGTTTCCAAAGACCCCACCATCATTCTTGGCATGGACGTGTCACATGGTTCACCTGGACAGTCTGATATTCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAGTGGCCTCTGATATCAAAGTATAGGGCATGTGTCCGTACCCAGTCTCCGAAGGTTGAAATGATCGATAATTTGTTCAAACAAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAACTTCTGATTGACTTCTATTCAACCTCCAAGAGAAAACCACAAAATATTATAATATTCAGGGATGGGGTAAGCGAATCACAGTTCAATCAAGTGTTGAACATTGAACTTAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTTGTAATTGTTGCCCAGAAAAATCACCACACAAAGTTTTTCCAGCCTTCATCTCCTGACAATGTTCCCCCAGGAACCGTTGTTGATAATAAAATATGTCATCCACGGAACTATGACTTCTATTTATGTGCACATGCTGGAATGATTGGAACTACCAGGCCTACGCATTACCATGTTCTGTTAGATGAGGTGGGTTTCTCGCCTGATGATCTGCAGGGTCTTGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTTGTTGCTCCCATATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAGGACAAGTCTGAGACTTCTTCCAGCCATGGTGGGCTGTCATCTACTGGACCGGTTCCCGTGCCCCAGATGCCTAAATTGAAGGACAACGTCTGCAACTCCATGTTCTTTTGTTGA 2775 0.4368 MFLFLHFYSFLSYKSIAYPEGYASEGSLPPPPPLPPNAVPLIADQGHPLEPVKKVSRVPIARRGLGSRGSKLPLLTNHFKVTVKNNDDYFFHYSVSFSYEDGRPVEGKGVGRKIIDRVQETYDCELAGKDFAYDGEKSLFTIGPLPRNKLEFTIVLEDLTSNRSNGNCSPDGQGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSESFQEAIRVFDIILRQHAAKHGCLLVRQSYFHNDPRNFADVGGGVLGCRGFHSSFRTTQRGLSLNIDVSTTMTIQPGPVVDFLIANQRVPNPYSIDWAKAKRTLKNLRIKTSPANQEYKITGLSDLPCREQTFSLKVKSGKDGNDASEEVTVYDYFVNHRKIDIRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDALKSNKYDSEPMLHNCGVSISNSFTEVEGRVLQAPRLMFGGREDNPRNGRWNLNNKKMVQPSRIEKWAVVNFSARCDTSGLVRDLIKCGGMKGVQIDNPFCVFEEKPQFRRSPPVARVEKMFEEIQSKLPGAPKFLLCLLPERKNCDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKINAKLGGLNSMLSIEHTPSIPVVSKDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKQVSEKEDEGIIRELLIDFYSTSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVVDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQGLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQMIKFEDKSETSSSHGGLSSTGPVPVPQMPKLKDNVCNSMFFC 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3917 924 SUPERFAMILY Ribonuclease H-like 562 883 IPR012337 -
Prci2g3917 924 SMART DUF1785_2 241 293 IPR014811 -
Prci2g3917 924 MobiDBLite consensus disorder prediction 888 908 - -
Prci2g3917 924 CDD PAZ_argonaute_like 293 409 - -
Prci2g3917 924 ProSiteProfiles Piwi domain profile. 578 885 IPR003165 GO:0003676
Prci2g3917 924 Gene3D - 474 639 - -
Prci2g3917 924 MobiDBLite consensus disorder prediction 163 188 - -
Prci2g3917 924 Pfam N-terminal domain of argonaute 72 231 IPR032474 -
Prci2g3917 924 FunFam Protein argonaute 3 646 924 - -
Prci2g3917 924 CDD Piwi_ago-like 454 879 IPR045246 -
Prci2g3917 924 Pfam Argonaute linker 2 domain 436 482 IPR032472 -
Prci2g3917 924 Pfam Piwi domain 579 885 IPR003165 GO:0003676
Prci2g3917 924 Gene3D paz domain 287 414 - -
Prci2g3917 924 ProSiteProfiles PAZ domain profile. 335 410 IPR003100 GO:0005515
Prci2g3917 924 Gene3D - 645 924 IPR036397 GO:0003676
Prci2g3917 924 Pfam Argonaute linker 1 domain 243 290 IPR014811 -
Prci2g3917 924 SMART Piwi_a_2 578 885 IPR003165 GO:0003676
Prci2g3917 924 MobiDBLite consensus disorder prediction 888 902 - -
Prci2g3917 924 Pfam Mid domain of argonaute 488 568 IPR032473 -
Prci2g3917 924 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 54 887 - -
Prci2g3917 924 FunFam Protein argonaute 7 288 414 - -
Prci2g3917 924 Pfam PAZ domain 298 426 IPR003100 GO:0005515
Prci2g3917 924 SUPERFAMILY PAZ domain 288 450 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3917 Prci-Chr2 48086892 48094702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3917 28 924 Eukaryotic Initiation Factors Gene Family AT1G48410 35.195 2.94e-163 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3917 K11593 - jre:108989696 1496.49