Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3916 ATGGATTCATTTCAGCCAGAAGGATATGCGTCGGAGGGCTCTTTGCCGCCGCCGCCACCTCTCCCACCGAATGCTGTACCACTGATAGCAGATCAAGGACATCCTCTTGAACCTGTTAAGAAGGTTTCTCGGGTTCCAATCGCCAGAAGAGGATTGGGATCCAGAGGAAGTAAATTACCTCTTTTAACTAACCACTTCAAAGTCACTGTTAAGAACAACGATGACTATTTCTTCCACTACAGTGTATCATTTTCTTACGAAGATGGACGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGACAGGGTGCAGGAGACTTATGACTGCGAGTTAGCAGGGAAGGATTTCGCCTATGACGGGGAGAAGAGTTTGTTTACTATTGGCCCTCTTCCTCGAAACAAGCTTGAATTCACTATTGTTTTGGAGGATCTCACATCAAACAGGAGTAATGGCAATTGCAGCCCTGATGGTCAAGGGAGTCCGAATGAGAGTGACAAGAAGAGGATGCGACGCCCAAATCGTTCCAAAACATTTAAAGTGGAGATCAGTTATGCTGCTAAGATCCCTATGCAGGCTATCACTAATGCACTGCGTGGTCAAGATTCTGAAAGTTTTCAAGAAGCCATAAGAGTTTTTGATATCATATTAAGGCAACATGCTGCCAAGCATGGTTGTTTACTTGTTCGCCAATCTTATTTCCACAATGATCCAAGGAATTTTGCTGACGTTGGAGGTGGGGTTTTAGGCTGCAGAGGATTCCATTCAAGTTTCAGAACCACACAACGTGGTCTGTCACTTAACATAGATGTATCTACTACCATGACCATACAGCCTGGGCCCGTGGTGGACTTTTTAATTGCCAACCAGCGTGTGCCAAATCCTTATTCAATTGACTGGGCAAAGGCCAAAAGAACGCTTAAAAATCTGAGGATTAAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAGAGAGCAGACGTTTTCTCTTAAAGTCAAAAGTGGAAAGGATGGCAACGATGCTTCAGAGGAAGTGACTGTTTATGATTATTTTGTTAATCATCGTAAAATAGATATCCGTTATTCTGCTGATCTTCCGTGTATCAATGTTGGGAAACCAAAACGTCCTACTTTCTTCCCACTTGAGCTTTGCTCTTTGGTATCCCTACAACGATATACAAAATCACTGTCTACCCTTCAAAGGGCTTCGCTGGTGGAGAAATCTAGGCAGAAGCCCCAAGAGAGGATGAGAGTTTTGTCTGATGCTTTAAAAAGCAACAAGTATGATTCTGAACCCATGCTTCATAATTGTGGGGTTTCAATAAGCAACAGCTTTACCGAGGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGGCCGGGAGGATAACCCAAGAAATGGGAGATGGAACTTGAATAATAAGAAAATGGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCCCGTTGTGATACAAGTGGGCTTGTGCGAGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCAAATAGACAACCCGTTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTAGCCCACCTGTGGCAAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGGGCACCCAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTGTGATCTCTATGGTCCGTGGAAACGGAAGAATCTTTCAGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCCACAAGGGTCAATGACCAATATCTCACTAATGTTCTGATGAAGATCAATGCTAAGCTCGGTGGCCTGAATTCAATGCTATCAATTGAACATACACCATCAATTCCTGTTGTTTCCAAAGACCCCACCATCATTCTTGGCATGGACGTGTCACATGGTTCACCTGGACAGTCTGATATTCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAGTGGCCTCTGATATCAAAGTATAGGGCATGTGTCCGTACCCAGTCTCCGAAGGTTGAAATGATCGATAATTTGTTCAAACAAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAACTTCTGATTGACTTCTATTCAACCTCCAAGAGAAAACCACAAAATATTATAATATTCAGGGATGGGGTAAGCGAATCACAGTTCAATCAAGTGTTGAACATTGAACTTAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTTGTAATTGTTGCCCAGAAAAATCACCACACAAAGTTTTTCCAGCCTTCATCTCCTGACAATGTTCCCCCAGGAACCGTTGTTGATAATAAAATATGTCATCCACGGAACTATGACTTCTATTTATGTGCACATGCTGGAATGATTGGAACTACCAGGCCTACGCATTACCATGTTCTGTTAGATGAGGTGGGTTTCTCGCCTGATGATCTGCAGGGTCTTGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTTGTTGCTCCCATATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAGGACAAGTCTGAGACTTCTTCCAGCCATGGTGGGCTGTCATCTACTGGACCGGTTCCCGTGCCCCAGATGCCTAAATTGAAGGACAACGTCTGCAACTCCATGTTCTTTTGTTGA 2736 0.439 MDSFQPEGYASEGSLPPPPPLPPNAVPLIADQGHPLEPVKKVSRVPIARRGLGSRGSKLPLLTNHFKVTVKNNDDYFFHYSVSFSYEDGRPVEGKGVGRKIIDRVQETYDCELAGKDFAYDGEKSLFTIGPLPRNKLEFTIVLEDLTSNRSNGNCSPDGQGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSESFQEAIRVFDIILRQHAAKHGCLLVRQSYFHNDPRNFADVGGGVLGCRGFHSSFRTTQRGLSLNIDVSTTMTIQPGPVVDFLIANQRVPNPYSIDWAKAKRTLKNLRIKTSPANQEYKITGLSDLPCREQTFSLKVKSGKDGNDASEEVTVYDYFVNHRKIDIRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDALKSNKYDSEPMLHNCGVSISNSFTEVEGRVLQAPRLMFGGREDNPRNGRWNLNNKKMVQPSRIEKWAVVNFSARCDTSGLVRDLIKCGGMKGVQIDNPFCVFEEKPQFRRSPPVARVEKMFEEIQSKLPGAPKFLLCLLPERKNCDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKINAKLGGLNSMLSIEHTPSIPVVSKDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKQVSEKEDEGIIRELLIDFYSTSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVVDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQGLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQMIKFEDKSETSSSHGGLSSTGPVPVPQMPKLKDNVCNSMFFC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3916 911 CDD Piwi_ago-like 441 866 IPR045246 -
Prci2g3916 911 ProSiteProfiles PAZ domain profile. 322 397 IPR003100 GO:0005515
Prci2g3916 911 SMART DUF1785_2 228 280 IPR014811 -
Prci2g3916 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 40 874 - -
Prci2g3916 911 Pfam Piwi domain 566 872 IPR003165 GO:0003676
Prci2g3916 911 Pfam N-terminal domain of argonaute 59 218 IPR032474 -
Prci2g3916 911 FunFam Protein argonaute 3 633 911 - -
Prci2g3916 911 ProSiteProfiles Piwi domain profile. 565 872 IPR003165 GO:0003676
Prci2g3916 911 CDD PAZ_argonaute_like 280 396 - -
Prci2g3916 911 Gene3D paz domain 274 401 - -
Prci2g3916 911 Gene3D - 461 626 - -
Prci2g3916 911 MobiDBLite consensus disorder prediction 875 895 - -
Prci2g3916 911 Pfam Mid domain of argonaute 475 555 IPR032473 -
Prci2g3916 911 SUPERFAMILY Ribonuclease H-like 549 870 IPR012337 -
Prci2g3916 911 SUPERFAMILY PAZ domain 275 437 IPR036085 GO:0005515
Prci2g3916 911 SMART Piwi_a_2 565 872 IPR003165 GO:0003676
Prci2g3916 911 MobiDBLite consensus disorder prediction 150 175 - -
Prci2g3916 911 Pfam Argonaute linker 1 domain 230 277 IPR014811 -
Prci2g3916 911 MobiDBLite consensus disorder prediction 875 889 - -
Prci2g3916 911 MobiDBLite consensus disorder prediction 12 26 - -
Prci2g3916 911 FunFam Protein argonaute 7 275 401 - -
Prci2g3916 911 Gene3D - 632 911 IPR036397 GO:0003676
Prci2g3916 911 MobiDBLite consensus disorder prediction 1 30 - -
Prci2g3916 911 Pfam PAZ domain 285 413 IPR003100 GO:0005515
Prci2g3916 911 Pfam Argonaute linker 2 domain 423 469 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3916 Prci-Chr2 48086892 48095644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3916 15 911 Eukaryotic Initiation Factors Gene Family AT1G48410 35.195 1.97e-163 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3916 K11593 - jre:108989696 1501.11