Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3907 ATGGCTGACAAGGCTGTCACCGTCCGAACCAGGAAATTCATGACAAACAGGCTTCTATCTCGCAAGCAGTTTATCATTGATGTACTTCATCCTGGGAGGCCAAACGTATCCAAGGCGGAACTTAAGGAGAAGTTAGCAAGGATGTACGATGTCAAAGACCCTAATGCGATTTTTGTCTTCAAGTTTAGAACTCACTTCGGAGGCGGGAAGTCGACTGGATTTGGCTTAATTTATGATTCTGTTGAAAATGCAAAGAAGTATGAGCCCAAGTACAGGCTTATCAGGAATGGACTCGCTTCCAAGGTAGAGAAGTCAAGGAAGCAAGTCAAGGAGCGAAAGAATAGGGCGAAGAAGATTCGTGGTGTAAAGAAGACCAAGGCTTCTGAGGCTGGAAAGAAGAAATGA 405 0.4469 MADKAVTVRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLASKVEKSRKQVKERKNRAKKIRGVKKTKASEAGKKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3907 134 PANTHER 40S RIBOSOMAL PROTEIN S24 1 130 IPR001976 GO:0003735|GO:0005840|GO:0006412
Prci2g3907 134 MobiDBLite consensus disorder prediction 110 134 - -
Prci2g3907 134 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Prci2g3907 134 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Prci2g3907 134 Gene3D - 1 133 - -
Prci2g3907 134 MobiDBLite consensus disorder prediction 102 134 - -
Prci2g3907 134 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Prci2g3907 134 Pfam Ribosomal protein S24e 26 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Prci2g3907 134 FunFam 40S ribosomal protein S24 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3907 Prci-Chr2 47986701 47988177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3907 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 84.962 1.03e-82 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3907 K02974 - sind:105165299 236.498