Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3900 ATGGACGTTCAAGTAATAAATGTGGAAGAAGGGACTGGTCACCGAGCTATGACTGATGATGGGGATGCTGAACCTAGTGAAGGTGAAGTCAATAATGCTGAAAACTCAGGATCTCATGTTGAGGATGGAATTCCTGAGCCATTTGTTGGTATGGAATTTGATTCTGAAGATGCTGTGAGGACTTTCTACAATGAGTATGCCAAACGTGTGGGCTTCACCACTAAAGTTGGCCAGCATGGCCGTTCTAAAGTTGATGGGGCAATCATGTACAGGGAGTATGTATGTGGCAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGTTGTGATGCAATGATTAAAGTTGAGTTAAAGGGTCAAAATAAATGGGTCATAACAAAGTTTGTGAAGGAGCATAGCCATTCCATGGTGAATCCCAGTAAGGTGCACCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGAGTGGGACTTGTTCCAAGTGGTGTTATGTATGTATCTGTGGATGGGAATCGTGTTTCTAGTGAGATTCGTGAATCTAAGAACACTCCTTTTGAGCCAAGTCATGCAGTGAGGAATTCTACAATGATGAACAATACTGGTAGGCCTTCTATCAGAAAGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAGTATTTTAAGAAAATGCAAGCTGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGAAAATCATATGTCAAATGTATTTTGGGCCGATGCAAGATCAAGGACAGCATACAGTCATTTTGGCGATGCAGTGACCCTGGACACGACATACAAAGTGAATCAATACAGGGTTCCTTTTGTTCCTTTTACTGGGGTGAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTTCTTTTGGATGATTCTGAGGCTTCTCTCTTGTGGCTCTTTAAGACATTTCTGACAGCAATGAATGACCGCCAACCTGTCTCTATAATTACAGATCAAAACAAAGCCACACAGACAGCAGTTTCTCAAGTTTTTCCTCAAACACGCCACTGTATAAGTAAATGGCATGTCTTGAGAGAAGGCCAAGAAAAGTTGGCACACGTTTGTCATAATCATCCAAACTTTCAGGTTGAACTTTATAATTGCATTAACCTAACAGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTCTATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCAGTCATTGTATGATGCTCGTGCTCGGTGGGTTCCAGCATATTTTCATGATTCATTTTTCGCTGCATTATCTCCAAGTAGAGGATTTGACAGTTCTTTTTTTGATGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAGTAGAAGCAGATTTTGAAACTATTTGCACCACACCGGTTTTGAGGACACCTTCACCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGAAAAATATTTTCTCTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTAAATAGCACATTCAGAGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTCACATTAAACCATTCAGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCATGTCTTGACTGTTTTCACAGTGACCAATGTACTTACATTACCACCACATTACATCTTAAGACGGTGGACAAGAAATGCAAAAATTGGTGTTGGATCAGATGAACGTGCTGGCGAATTACATGGACAGGAGTCTCTAACATCAAGGTATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTGAGTGTCCTTAAAGAAGGTGGGAAGAAGATTGCTGCTGTGAAGAAAGGTGTTGCCAAAGTTGCTCCTCCTAGCAATCAGACTGGTGGGATTGCTTATGATGACAAAAAAACTTCTACGTCAACTTCAGATACAACCCCTCTTCTATGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAACGATGCTGGTGCTCCTGTTCAATCAGTTGCTGATCTGAATTTGCCACGAATGGCTCCTGTGTCCCTTCAGCGAGATGATGGTCCATCTGACAACATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAGTCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGTTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAGGTAAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCTTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAATCTGAAGTAAAGTTTCAGGTGTCCAGGGACACATTGGGTGCCATGTTGCGATCGATGGCCTATATTCGTGAGCAACTTTCTCATGCTGGAGACACGCAGTCAGAGCCTGTATTGAAAAGGCATCGAAAATAA 2649 0.413 MDVQVINVEEGTGHRAMTDDGDAEPSEGEVNNAENSGSHVEDGIPEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKVDGAIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKEHSHSMVNPSKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSVDGNRVSSEIRESKNTPFEPSHAVRNSTMMNNTGRPSIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENHMSNVFWADARSRTAYSHFGDAVTLDTTYKVNQYRVPFVPFTGVNHHGQMILFGCALLLDDSEASLLWLFKTFLTAMNDRQPVSIITDQNKATQTAVSQVFPQTRHCISKWHVLREGQEKLAHVCHNHPNFQVELYNCINLTETIEEFESSWSSILDKYELRRNDWLQSLYDARARWVPAYFHDSFFAALSPSRGFDSSFFDGYVNQQTTLPMFFREYERALENWFEKEVEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILRRWTRNAKIGVGSDERAGELHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAALSVLKEGGKKIAAVKKGVAKVAPPSNQTGGIAYDDKKTSTSTSDTTPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDNMVCRKVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGDTQSEPVLKRHRK 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3900 882 MobiDBLite consensus disorder prediction 679 698 - -
Prci2g3900 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 662 IPR031052 GO:0006355
Prci2g3900 882 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Prci2g3900 882 MobiDBLite consensus disorder prediction 185 212 - -
Prci2g3900 882 MobiDBLite consensus disorder prediction 681 698 - -
Prci2g3900 882 Pfam SWIM zinc finger 550 584 IPR007527 GO:0008270
Prci2g3900 882 SMART 26again6 561 588 IPR006564 GO:0008270
Prci2g3900 882 MobiDBLite consensus disorder prediction 1 44 - -
Prci2g3900 882 Pfam MULE transposase domain 272 363 IPR018289 -
Prci2g3900 882 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3900 Prci-Chr2 47927143 47933611 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci2g3900 MULE 2.6e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3900 - - qsu:112033076 1414.05