Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3897 ATGGACGTTCAAGTAATAAATGTGGAAGAAGGGACTGGTCACCGAGCTATGACTGATGATGGGGATGCTGAACCTAGTGAAGGTGAAGTCAATAATGCTGAAAACTCAGGATCTCATGTTGAGGATGGAATTCCTGAGCCATTTGTTGGTATGGAATTTGATTCTGAAGATGCTGTGAGGACTTTCTACAATGAGTATGCCAAACGTGTGGGCTTCACCACTAAAGTTGGCCAGCATGGCCGTTCTAAAGTTGATGGGGCAATCATGTACAGGGAGTATGTATGTGGCAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGTTGTGATGCAATGATTAAAGTTGAGTTAAAGGGTCAAAATAAATGGGTCATAACAAAGTTTGTGAAGGAGCATAGCCATTCCATGGTGAATCCCAGTAAGGTGCACCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGAGTGGGACTTGTTCCAAGTGGTGTTATGTATGTATCTGTGGATGGGAATCGTGTTTCTAGTGAGATTCGTGAATCTAAGAACACTCCTTTTGAGCCAAGTCATGCAGTGAGGAATTCTACAATGATGAACAATACTGGTAGGCCTTCTATCAGAAAGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAGTATTTTAAGAAAATGCAAGCTGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGAAAATCATATGTCAAATGTATTTTGGGCCGATGCAAGATCAAGGACAGCATACAGTCATTTTGGCGATGCAGTGACCCTGGACACGACATACAAAGTGAATCAATACAGGGTTCCTTTTGTTCCTTTTACTGGGGTGAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTTCTTTTGGATGATTCTGAGGCTTCTCTCTTGTGGCTCTTTAAGACATTTCTGACAGCAATGAATGACCGCCAACCTGTCTCTATAATTACAGATCAAAACAAAGCCACACAGACAGCAGTTTCTCAAGTTTTTCCTCAAACACGCCACTGTATAAGTAAATGGCATGTCTTGAGAGAAGGCCAAGAAAAGTTGGCACACGTTTGTCATAATCATCCAAACTTTCAGGTTGAACTTTATAATTGCATTAACCTAACAGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTCTATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCAGTCATTGTATGATGCTCGTGCTCGGTGGGTTCCAGCATATTTTCATGATTCATTTTTCGCTGCATTATCTCCAAGTAGAGGATTTGACAGTTCTTTTTTTGATGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAGTAGAAGCAGATTTTGAAACTATTTGCACCACACCGGTTTTGAGGACACCTTCACCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGAAAAATATTTTCTCTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTAAATAGCACATTCAGAGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTCACATTAAACCATTCAGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCATGTCTTGACTGTTTTCACAGTGACCAATGTACTTACATTACCACCACATTACATCTTAAGACGGTGGACAAGAAATGCAAAAATTGGTGTTGGATCAGATGAACGTGCTGGCGAATTACATGGACAGGAGTCTCTAACATCAAGGTATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTGAGTGTCCTTAAAGAAGGTGGGAAGAAGATTGCTGCTGTGAAGAAAGGTGTTGCCAAAGTTGCTCCTCCTAGCAATCAGACTGGTGGGATTGCTTATGATGACAAAAAAACTTCTACGTCAACTTCAGATACAACCCCTCTTCTATGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAACGATGCTGGTGCTCCTGTTCAATCAGTTGCTGATCTGAATTTGCCACGAATGGCTCCTGTGTCCCTTCAGCGAGATGATGGTCCATCTGACAACATGGTGGTTCTCCCCTGTCTGAAGTCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGTTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAGGTAAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCTTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAATCTGAAGTAAAGTTTCAGGTGTCCAGGGACACATTGGGTGCCATGTTGCGATCGATGGCCTATATTCGGAGACACGCAGTCAGAGCCTGTATTGAAAAGGCATCGAAAATAAGGCTGCGAAGTTTCTTTTCCATGCTCAGACTAAAGACTCCGAGACTAGCAAGTGCATGTTTGTATCCATTAGATATCAACTTGGGGAAGGAAACATCAAACATGACTCACGCTAAATATAAGTGTGGTGGGAGTCGTGTGCCAAATGTGATCAAAAGAAGGAATTCCTCCTTTACATGGAGAGGGATCCGTGCTGCTCGGGACAAGTTCAAGAATGGGTTAGGGAAGAAAATTGGAAATGGCAAGAACAACTTAGTTTGA 2877 0.4147 MDVQVINVEEGTGHRAMTDDGDAEPSEGEVNNAENSGSHVEDGIPEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKVDGAIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKEHSHSMVNPSKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSVDGNRVSSEIRESKNTPFEPSHAVRNSTMMNNTGRPSIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENHMSNVFWADARSRTAYSHFGDAVTLDTTYKVNQYRVPFVPFTGVNHHGQMILFGCALLLDDSEASLLWLFKTFLTAMNDRQPVSIITDQNKATQTAVSQVFPQTRHCISKWHVLREGQEKLAHVCHNHPNFQVELYNCINLTETIEEFESSWSSILDKYELRRNDWLQSLYDARARWVPAYFHDSFFAALSPSRGFDSSFFDGYVNQQTTLPMFFREYERALENWFEKEVEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILRRWTRNAKIGVGSDERAGELHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAALSVLKEGGKKIAAVKKGVAKVAPPSNQTGGIAYDDKKTSTSTSDTTPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDNMVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIRRHAVRACIEKASKIRLRSFFSMLRLKTPRLASACLYPLDINLGKETSNMTHAKYKCGGSRVPNVIKRRNSSFTWRGIRAARDKFKNGLGKKIGNGKNNLV 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3897 958 MobiDBLite consensus disorder prediction 679 698 - -
Prci2g3897 958 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Prci2g3897 958 MobiDBLite consensus disorder prediction 185 212 - -
Prci2g3897 958 Pfam SWIM zinc finger 550 584 IPR007527 GO:0008270
Prci2g3897 958 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Prci2g3897 958 MobiDBLite consensus disorder prediction 681 698 - -
Prci2g3897 958 SMART 26again6 561 588 IPR006564 GO:0008270
Prci2g3897 958 MobiDBLite consensus disorder prediction 1 44 - -
Prci2g3897 958 Pfam MULE transposase domain 272 363 IPR018289 -
Prci2g3897 958 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 662 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3897 Prci-Chr2 47927137 47936473 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci2g3897 MULE 2.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3897 - - qsu:112033076 1397.49