Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3885 ATGGAGGATGATTTTGATACCCAGAAAATCAGAAATATATGTATTTTGGCACATGTTGATCATGGAAAGACTACACTGGCTGATCATTTGATTGCTGCTTCAGGGGGTAGCCTACTTCACCCGAAGTTGGCTGGACGAGTTAGGTTCATGGACTATCTTGACGAGGAGCAAAGGAGAGCCATCACCATGAAGAGCTCTTCTATTGCTCTTAAGTATAAAGACTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTTTGCTGTGAGGTGTCCACTGCTGCTAGATTGAGTGATGGTGCATTAATTTTGGTCGATGCTGTTGAAGGTGTGCATATTCAAACCCATGCTGTGTTGCGGCAATGTTGGATTGAGAAGCTCTCACCGTGCTTGGTTCTTAACAAGATTGATAGGTTGATTAGTGAATTGAAGTTGAGTCCTATGGAAGCCTATATTCGGTTATTACGGATTGTGCATGAGGTCAATGGGATAGTCAGTACATATAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGCGATGTGACTGTTGATGAAAACAGTGACCTCATAGAGGATGATGAAGAAGATATGTTTCAACCACAGAAAGGGAATGTGGCATTTGTGTGTGCACTGGATGGTTGGGGATTTGGAATTCATGAATTTGCTGAATTTTATGCTTCAAAATTGGGGGCTAGTGCTGCTGCATTGCAAAAAGCCTTATGGGGTCCTAAGTATTTCAATTCAAAAACTAAAATGATTGTTGGTAAGAAAGGTATAGGTGGAGGAAGTAAGGCAAGGCCAATGTTTGTCCAGTTTGTTCTTGAACCACTATGGCAGGTATACCAAGGAGCTCTAGAGGGCAATGGTGACAAAGCAATGCTTGAAAAAGTCATTAAGTCATTTAATTTGTCTATATCATCTCGTGAATTGCAAAATAAAGACCCAAAAGTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCTCTGTCAGATACAATCTTATCAATGGTGGTGAAGTGTATGCCAGATCCAGTATCTGCACAATCATTTCGTATATCACGCCTTCTTCCAAAGAGAGAGGTTCTTGATAAAGGAGTTGATCAGAATGTGCTTGCAGAGGCAGAGCTTGTGAGAAAATCTGTAGAGGCATGTGATTTGAAACCTGAAGCTCCATGTGTTGCTTTTGTGTCAAAAATGTTTGCTGTGCCAGTTAAAATGCTTCCTGATAGGGGTTCGCATGGGGAGCTCATGAACTATTCTGGTGATGGAGAGGGTGAATCAGATGAGTGTTTCCTGGCATTTGCTAGGATATTTAGTGGAACTTTGTCTGCAGGACAGAAAGTTTTTGTGCTTTCAGCATTGTATGATCCTCTAAAAGGGGAACAAATGCAAAAGCATGTTCAAGAGGCTGAATTACATTCTTTATATCTAATGATGGGCCAAGGCTTGAAAGTCGTGACATCTGCTAAAGCAGGAAATATTGTTGCTATCCGAGGCCTTGGCCAACATATCCTGAAGAGTGCTACACTCTCATCCAGCAAGAATTGCTGGCCTTTCTCTAGTATGGCTTTCCAGGTTTCCCCAACTTTGAGAGTTGCAATTGAACCATCTGACCCTGCAGAAATGAGTGCACTATTGAAAGGCTTGAGGCTTCTAAATAGAGCGGACCCATTTGTTGAGGTCACTGTATCTGCAAGAGGAGAACATGTCTTAGCTGCAGCAGGAGAGGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTGCTAAGGTAAGCTTGGAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGTGTCCAGCATGCTTGAAAATTTGAAAGCTCTTAGTAAGATCTCAGATTATGTTGAAAAAACGACACCAAATGGAAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTCTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGGGATGCCATTGGAGTAAAGTCTGGGCATAATGTTAAAAATTTGGAGGCTCAGAGATCAGGTATTTTTGAAAATGATAATCCAACTGAAGTGCTAAAAAAACGCATAATGGATGCATTGGAAAGTGAGATTTTGAGCGGGAATGGGAATGACAAGGATTATGCTGTCAAATGTAAGGCAAAGTGGTTAAAACTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCGAACATTCTCTTTACTCCTGATGTCAAAGCTGAGAGTACAGATAGCTCTATTCTAATACGTGGTGATTGTCATGTATCTGAAAGATTGGGTTTTACTGATGATTCTAGTACTTCAAATATAGAGGCCGGGACACCCTCTAACGTGAATGAAGCATTAAACATGGAGGCTAAGCGTCTTGAGAGCAGTGTCATATCTGGGTTCCAACTGGCCACTGCAGCTGGACCCTTATGTGATGAACCTATGTGGGGTTTGGCGTTTGTTATTGAGGCATACATTTATCCCTATTCAGGGCAGCATGATGAAACTGAAACACACCAACAATCTGAGCAGTATGGCATCTTTGCAGGGCAAATAATCACAACTGTCAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCCATGTACTTTTGTGAGTTGAATACCCCTACTGAATATTTGGGTCCCACGTATGCTGTACTTGCTCGAAGACGGGCCCGAGTTTTAAAGGAAGAGATGCAGGAAAGTTCCCCTCTCTTCACTGTGCACGCATATGTGCCTGTTTCCGAAAGTTTTGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGAGCTGCTAGTGCACTTCTTGTACTTAGTCACTGGGAAGCACTTTCTGAGGATCCTTTCTTCGTACCTAAAACTGAAGAGGAGATTGAAGAGTTTGGAGATGGCTCTAGTGTGCTTCCTAATACAGCAAGAAAGTTAATTGATGCAGTCAGACGCCGTAAGGGCCTTCATGTGGAGGAAAAAATAGTACAACATGGAACAAAGCAGCGGACACTAGCTCGTAAGGTTTGA 3084 0.4225 MEDDFDTQKIRNICILAHVDHGKTTLADHLIAASGGSLLHPKLAGRVRFMDYLDEEQRRAITMKSSSIALKYKDYSINLIDSPGHMDFCCEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVHEVNGIVSTYKSEKYLSDVDSILAGPSGDVTVDENSDLIEDDEEDMFQPQKGNVAFVCALDGWGFGIHEFAEFYASKLGASAAALQKALWGPKYFNSKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGALEGNGDKAMLEKVIKSFNLSISSRELQNKDPKVVLQAVMSRWLPLSDTILSMVVKCMPDPVSAQSFRISRLLPKREVLDKGVDQNVLAEAELVRKSVEACDLKPEAPCVAFVSKMFAVPVKMLPDRGSHGELMNYSGDGEGESDECFLAFARIFSGTLSAGQKVFVLSALYDPLKGEQMQKHVQEAELHSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSKNCWPFSSMAFQVSPTLRVAIEPSDPAEMSALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVSYKETIEGEVSSMLENLKALSKISDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDAIGVKSGHNVKNLEAQRSGIFENDNPTEVLKKRIMDALESEILSGNGNDKDYAVKCKAKWLKLLRRIWALGPRQIGPNILFTPDVKAESTDSSILIRGDCHVSERLGFTDDSSTSNIEAGTPSNVNEALNMEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPYSGQHDETETHQQSEQYGIFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGPTYAVLARRRARVLKEEMQESSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLHVEEKIVQHGTKQRTLARKV 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3885 1027 CDD EF2 11 234 - -
Prci2g3885 1027 SUPERFAMILY EF-G C-terminal domain-like 533 608 IPR035647 -
Prci2g3885 1027 Gene3D - 884 1018 - -
Prci2g3885 1027 Gene3D - 2 207 IPR027417 -
Prci2g3885 1027 FunFam Elongation factor like GTPase 1 226 335 - -
Prci2g3885 1027 Gene3D - 631 882 IPR014721 -
Prci2g3885 1027 Pfam Elongation factor G C-terminus 886 970 IPR000640 -
Prci2g3885 1027 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Prci2g3885 1027 Gene3D Elongation Factor G (Translational Gtpase), domain 3 535 611 - -
Prci2g3885 1027 Gene3D Translation factors 352 533 - -
Prci2g3885 1027 FunFam Elongation factor like GTPase 1 884 1019 - -
Prci2g3885 1027 CDD eEF2_snRNP_like_C 888 966 - -
Prci2g3885 1027 NCBIfam small GTP-binding protein domain 9 140 IPR005225 GO:0005525
Prci2g3885 1027 SUPERFAMILY Ribosomal protein S5 domain 2-like 610 887 IPR020568 -
Prci2g3885 1027 FunFam Translation elongation factor 2 535 611 - -
Prci2g3885 1027 CDD EF2_II 399 521 - -
Prci2g3885 1027 FunFam Elongation factor Tu family protein 352 533 - -
Prci2g3885 1027 SUPERFAMILY EF-G C-terminal domain-like 888 986 IPR035647 -
Prci2g3885 1027 CDD aeEF2_snRNP_like_IV 607 892 - -
Prci2g3885 1027 Pfam Elongation factor Tu GTP binding domain 9 349 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 FunFam Elongation factor 2-like protein 1 214 - -
Prci2g3885 1027 CDD EF2_snRNP_III 536 607 - -
Prci2g3885 1027 SUPERFAMILY Translation proteins 390 530 IPR009000 -
Prci2g3885 1027 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 1026 - -
Prci2g3885 1027 SMART EFG_C_a 885 974 IPR000640 -
Prci2g3885 1027 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 242 IPR000795 GO:0003924|GO:0005525
Prci2g3885 1027 Pfam Elongation factor Tu domain 2 440 518 IPR004161 GO:0005525
Prci2g3885 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 350 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3885 Prci-Chr2 47905094 47910444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3885 3 1027 Eukaryotic Initiation Factors Gene Family AT3G22980 73.301 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3885 K14536 - tcc:18611819 1642.48