Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3880 ATGGATTTACAGAAAAATCTCCAGTCGAGGCCTTCTACTTCTTCTTCGAGTGCTTTTATTCCGCCACACCGCACCCAACTTCACCCTCGGATGATCTCAGTCTATTCTTCTCCGCCTCACCCGAACCTTCAGCCAAATTCTAACAGGCAATCAACCAAATGGCTCATCCTTGCCGCCTCTCTTTGCACCGTCCCTTTCTTGTTCTACCTCTTCACTACCGCGCAAAAAATCCACACCTCTTCCAAATTCGCTGAGCCAAAGTCTACATTCTTCGGACTTGTTATCAATGCGGGTTCCTCGTATACCAAAATCAACGTCTTCGAGTTTCTCGGGGAGGGTCGGATTCCCTTCCTTGACGAGGCTGGGTCGAACTCGATGAAGATTGGGGTTGGATTGATGGATTTTGCAGGGGACCCTGATGGGGCCGGAGCCTCCATTGTGCAGCTAGTCGAGTTTGCTAAGCAGCAAGTCCCGAAGAAGGAGTGGGGAAGGACTAAGGTTCAGTTGATAGCCACGCCGGAGTTGGAGAATTTGAGTGTAGATGTGAGGGAGAAGATATTGGACTCTTGCAGACAGTTTCTAAGGTCGTCCGCGTTTTTGTTCAAGGATGAATGGACACGAGTAATTCGAGGTGAAGAGCAAGGTATCTCTTCTTGGGTTGCTGCAAATTATGCTCTTGGAAACTTGGGACGTGAGCCTCAAGAAACTGCTGGAATAGTTCAACTTGGTGGGGATTCTTTGCAGGTCACATTGGCGTTGTTAAATTCAAAGTCAGTACAGCCTTCCCAGACTATTAAATTGTCTGGAGTTACCTACAATCTCTATACTCAGAGTTGGCCCGAACTTGGCCAGGATGTAGCATTGAAATCGTTGGAGGAACTGCTTAATCATAGGGAATCAAAATTTTCTTCAAGATCTATCAGAAACAATATTGGTAACCCTTGCATTCCAAAAGGGTATTCTTGGAACTCTAATGCAAGTTATGTGCATCGCCCAATTGTCCAAGCTGCTGGAAATTATTCTGCATGCAAATCTGAAACTGGGACATTTTTAAAGAGAAGAGAAGATAGATGCCAACACCAACCATGTGAAGTTACCTCTTCTTTTCTCAAGTTATCAGGCGTGCAAATTTCTTCAGGAAACTTCTTCTACACCTCTGAGTTTTTTGGGATGGTTCCTAGGGCTTCTTTGTCTGAACTGGAAGCAGCTGGCCGACATTACTGTGAAGATCATTGGGATGCTCTTAAAAATCAACATAATGAAATTGATGATCTGGATCTATCAAAGTATTGTTTCTCTTCTGCGTATATGGTGGCAATTTTGCATGACGTTTTTGGGATATCTATGGAAGAGAGAAGGATTGGATTTGGAAATCGGAAGGGGACTTTTCACATTGACTGGACCCTTGGATCCTTCATTGTTGAAACGATGACAGAACCCGTTGAATTGGAACCTGTGGACACAGGGCTGATTGTTGGGAATGAATCAGTCACATACTTCTCAATGTTTGCATTTCTTTTTCTATTTGTACTGGCTGCATTCTTTGTACTGCAATGGAGAAAGCCACAATTAAAGACTGTATATGACCTCGAGAAGGGACACTACATTGTTACTCGTGTACCTAGGTAA 1629 0.442 MDLQKNLQSRPSTSSSSAFIPPHRTQLHPRMISVYSSPPHPNLQPNSNRQSTKWLILAASLCTVPFLFYLFTTAQKIHTSSKFAEPKSTFFGLVINAGSSYTKINVFEFLGEGRIPFLDEAGSNSMKIGVGLMDFAGDPDGAGASIVQLVEFAKQQVPKKEWGRTKVQLIATPELENLSVDVREKILDSCRQFLRSSAFLFKDEWTRVIRGEEQGISSWVAANYALGNLGREPQETAGIVQLGGDSLQVTLALLNSKSVQPSQTIKLSGVTYNLYTQSWPELGQDVALKSLEELLNHRESKFSSRSIRNNIGNPCIPKGYSWNSNASYVHRPIVQAAGNYSACKSETGTFLKRREDRCQHQPCEVTSSFLKLSGVQISSGNFFYTSEFFGMVPRASLSELEAAGRHYCEDHWDALKNQHNEIDDLDLSKYCFSSAYMVAILHDVFGISMEERRIGFGNRKGTFHIDWTLGSFIVETMTEPVELEPVDTGLIVGNESVTYFSMFAFLFLFVLAAFFVLQWRKPQLKTVYDLEKGHYIVTRVPR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3880 542 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 49 479 IPR000407 GO:0016787
Prci2g3880 542 Gene3D Exopolyphosphatase. Domain 2 210 461 - -
Prci2g3880 542 Gene3D - 91 473 - -
Prci2g3880 542 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g3880 542 Pfam GDA1/CD39 (nucleoside phosphatase) family 85 477 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3880 Prci-Chr2 47859586 47869484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3880 45 476 Nodulin-like Gene Family AT4G19180 22.737 7.90e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3880 K01510 - jre:109014015 644.039