Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3869 ATGAAGATCGGAGTTGTTATTTATGCTTGTGTGACCCTGTTTGCTTTGCTTTCTGCTACAAGCAAAGCCAATCAGGAAGATCAACTGGAAGAGCTGATTCTATCCAAGAGATTAAAGAACAAGCTTCTGACAAGTTCTTGGGAAGAGAAAGATGTGTCCAAACAGCAATATTATGTGTCATCCCAAGAAGGGCTAATGCAGAGTGATAAGATTAGTGCATTTCCTGGACAGCCTTATGGAGTCAATTTTAATCAATACTCTGGTTATGTTACAGTTGATCCAAATGCTGGAAGAGCCCTTTTCTATTACTTTGTAGAGTCTCCATATAATCCTTCTACCAAACCACTAGTGTTGTGGCTCAATGGAGGGCCAGGATGTTCTTCATTTGGCTATGGGGCGTTTCAGGAATTGGGACCCTTCAGAGTCAACTCTAATGGAAAAAGTCTATTTCTTAACGAGTATGCTTGGAACAATGTGGCAAATGTGTTGTTCTTGGAATCACCAGCTGGAGTGGGCTTTTCCTACTCAAACACTTCGTCTGATTATGATCAAGCAGGAGATAAGTTTACAGCAAGAGATGCCTATGTGTTCCTCATCAATTGGCTTGAGAGATTTCCACAATACAAATCCAGAGATTTCTTCATCACTGGAGAGAGCTACGCTGGTCATTATGTGCCTCAACTTGCTTACAACATTTTGGTCCAAAATATTTTCTCTGGACAAACCATTATCAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATCGATGATGAAACAAGTTCAGAGGGAATATTCGATTACTTATGGACACATGCTCTAATCTCAGATGAAACCCATTCAAGTATTGATAAGTACTGTGACTTTGCCACTGATAATGTTTCAGACGTGTGTGTCAGTGCAACGAGAAAGGCCCTTCAGGAGAAAGGGAAGATAGATTGGTACAACATTTACGCTCCACTCTGCCGTGACACTTCACTCAGAAATGGTCCGCCTGGTTCTGTGTACAATTATGATCCATGCTCTGATTACTACGTGGAAGCCTATATGAATAACCCAGACGTCCAGCTAGCTCTCCATGCTCTTCCCACAAACTGGACTCATTGCAAAGATTATAACTGGACAGACAGCCCAAGTACGATCCTTCCCACCATCAAGGATCTCATCAGATTTGGCATTAAAGTGTGGATTTACAGCGGGGACACAGATGGACGGGTACCAGTCACATCGTCTAAGTACTCAATCAACCGTCTCAACTTTCCTGTTGAGGTTCCATGGCGACCATGGTACTCAGGAAATGAGGTAGGAGGATATGTGGAGCAATACAAAGGATTAACGATTGTGACAGTGAGAGGAGCTGGCCACACTGTTCCCAGTTGGCAACCAGCAAGGGCCCTCATCCTCATTACTTCATTCCTCAAGCGCTCTGCGCCTCCGGCTTCACCATGGCCATAG 1455 0.4364 MKIGVVIYACVTLFALLSATSKANQEDQLEELILSKRLKNKLLTSSWEEKDVSKQQYYVSSQEGLMQSDKISAFPGQPYGVNFNQYSGYVTVDPNAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSFGYGAFQELGPFRVNSNGKSLFLNEYAWNNVANVLFLESPAGVGFSYSNTSSDYDQAGDKFTARDAYVFLINWLERFPQYKSRDFFITGESYAGHYVPQLAYNILVQNIFSGQTIINLKGIAIGNAWIDDETSSEGIFDYLWTHALISDETHSSIDKYCDFATDNVSDVCVSATRKALQEKGKIDWYNIYAPLCRDTSLRNGPPGSVYNYDPCSDYYVEAYMNNPDVQLALHALPTNWTHCKDYNWTDSPSTILPTIKDLIRFGIKVWIYSGDTDGRVPVTSSKYSINRLNFPVEVPWRPWYSGNEVGGYVEQYKGLTIVTVRGAGHTVPSWQPARALILITSFLKRSAPPASPWP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3869 484 ProSitePatterns Serine carboxypeptidases, serine active site. 215 222 IPR018202 GO:0004185
Prci2g3869 484 FunFam Carboxypeptidase 65 324 - -
Prci2g3869 484 Gene3D - 381 474 - -
Prci2g3869 484 FunFam Carboxypeptidase 381 475 - -
Prci2g3869 484 Gene3D - 341 375 - -
Prci2g3869 484 SUPERFAMILY alpha/beta-Hydrolases 72 475 IPR029058 -
Prci2g3869 484 ProSitePatterns Serine carboxypeptidases, histidine active site. 445 462 IPR033124 GO:0004185
Prci2g3869 484 Gene3D alpha/beta hydrolase 66 324 IPR029058 -
Prci2g3869 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 201 226 IPR001563 GO:0004185|GO:0006508
Prci2g3869 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 164 IPR001563 GO:0004185|GO:0006508
Prci2g3869 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 175 IPR001563 GO:0004185|GO:0006508
Prci2g3869 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Prci2g3869 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 70 462 IPR001563 GO:0004185|GO:0006508
Prci2g3869 484 FunFam Carboxypeptidase 337 477 - -
Prci2g3869 484 Pfam Serine carboxypeptidase 75 474 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3869 Prci-Chr2 47764750 47767564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3869 392 473 Calmodulin-binding Proteins AT2G22960 36.145 1.29e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3869 K16297 - gmx:100779407 725.702