Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3867 ATGAAGGTATTTGCTCTTTATGCTTGTGTGAGTCTGTTTGCTTTGCTGTGTGTTACTAGCAAAGCGAACCAGCAGGCAGAAAGGCTTCAAGAATTGATTGTATCAAAGAGATCGTCAAAGAATAATGAAGTCGATCATCTGATAAATTCTTGGTGGGACGAGGAAGATTTGTCCAAACAAAAGTACTGTGTTTCAGAACAAGAGGGATTAAGGAAGGCTGATAAGATTAGGTCATTACCTGGACAGCCTAAGAGGGTCAATTTTGATCAATACTCAGGTTATGTCACTGTTAATCCAAAAGCTGGAAGAGCTCTTTTCTATTATTTTGTGGAATCTCCATATAACCCTTCCGCTAAACCACTTGTCTTGTGGCTCAATGGAGGACCAGGTTGTTCGTCATTGGGTTATGGGGCCATGCAAGAATTGGGACCCTTTCGAGTCAACTCTAATGGAAAAACACTATTCCTCAATGAATATTCTTGGAACAATGTGGCAAACATGCTATTTTTGGAATCACCTGCTGGAGTAGGATTTTCCTATTCAAACACATCATCCAATTATGATGAAGCAGGCGACAAGTTTACAGCAAAAGATGCTTACGTGTTCCTCATCAATTGGCTTGAGAGGTTTCCACAGTACAAATCCAGAGATTTCTTCATCACAGGAGAGAGCTATGCTGGTCACTACGTGCCTCAGCTTGCTTACACCATTTTAGTTCACAATAAGCACAAACCCAAAACCATTATTAACCTCAAAGGCATTGCTATAGGGAATCCTTGGAGTTGGGTTGATGATGATACAAGCTTAAAGGGAGTGTATGATTACTTTTGGACACATGCCTTGAACTCAGATGAAACCCATGAAGCTATTGATAAGCACTGTGACTTTGGTTCCCATATTTCAGAAGAATGTGTCAACTCCATAAATAAAGCATACCAGGAGATAGGCAACATAGATCAGTATAATATTTATGCTCCTATCTGTCACAACACTTCACTCAGAAATGGCCAACCCGGTTCTGTAAATAATTTCGATCCCTGCTCTGAGAACTACGTGAAAGCCTATCTGAATAACCTAAAGGTACAACAAGCTCTCCATGCAGTTCCCACAAATTGGACTCATTGCAGAAAGTACAAGTGGACAGACAGACCAAGTGGCATCCTACCCACCACCAAGCATCTAATTGCAAGTCATATCAGATTCTGGATTTACAGTGGAGACACAGATGGAATTGTGCCAACCATATCGACTAGGTACTCTATCAAGCGCCTCAACCTTCCTGTCCAGGTTTCTTGGCGTCCATGGTACTCTGGAAATGAGGTAGGAGGATACGTGGAGCAATACGAGGGACTAAGCTTTGTGACAGTGAGAGGAGCTGGGCATGAAGTTCCTAGTTGGAAACCTGCAAGGGCTCTTACTCTTTTCACTTCTTTCCTCAACCACACTCTCCCTCCTCATTCTCCATCTTCATAG 1473 0.4216 MKVFALYACVSLFALLCVTSKANQQAERLQELIVSKRSSKNNEVDHLINSWWDEEDLSKQKYCVSEQEGLRKADKIRSLPGQPKRVNFDQYSGYVTVNPKAGRALFYYFVESPYNPSAKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSNGKTLFLNEYSWNNVANMLFLESPAGVGFSYSNTSSNYDEAGDKFTAKDAYVFLINWLERFPQYKSRDFFITGESYAGHYVPQLAYTILVHNKHKPKTIINLKGIAIGNPWSWVDDDTSLKGVYDYFWTHALNSDETHEAIDKHCDFGSHISEECVNSINKAYQEIGNIDQYNIYAPICHNTSLRNGQPGSVNNFDPCSENYVKAYLNNLKVQQALHAVPTNWTHCRKYKWTDRPSGILPTTKHLIASHIRFWIYSGDTDGIVPTISTRYSIKRLNLPVQVSWRPWYSGNEVGGYVEQYEGLSFVTVRGAGHEVPSWKPARALTLFTSFLNHTLPPHSPSS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3867 490 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Prci2g3867 490 SUPERFAMILY alpha/beta-Hydrolases 73 483 IPR029058 -
Prci2g3867 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 451 468 IPR033124 GO:0004185
Prci2g3867 490 FunFam Carboxypeptidase 70 330 - -
Prci2g3867 490 Gene3D - 347 380 - -
Prci2g3867 490 FunFam Carboxypeptidase 344 483 - -
Prci2g3867 490 Gene3D - 387 480 - -
Prci2g3867 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 468 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 Pfam Serine carboxypeptidase 80 480 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Prci2g3867 490 Gene3D alpha/beta hydrolase 71 330 IPR029058 -
Prci2g3867 490 FunFam Carboxypeptidase 387 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3867 Prci-Chr2 47735132 47738472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3867 352 480 Calmodulin-binding Proteins AT2G22960 29.104 5.27e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3867 K16297 - gmx:100807212 660.218