Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3859 ATGGATTATGAACTGCGAAGAGCGAGAGAGAAGCTAGAGAGAGAACAGAAGGAGAGGAAGGAGAAGGCCCGGTTGAAATTGGAGAGGGAAAGGAAGGCTAAACGAGAGGCTAGGAATCAAAGGGAAGCCATTGAAGCTGCTCAGAGATCTCGCCGTATTGATGCAGCCGAGGCTCAACAAAAGGCTGAGGAACAGATGCAAGAAAGCTTACTTGCTGGAAGAGGAGTCGTGTTTTACCGTCTATTAGGTGCTGTACCTTGTCAAGGTAATGGTGATAAGATCAAACTGCCACCTTCATGCTTCACAGAATTGTCTGATCAGGGTGCCCTTGATAAGGGACCCATGTACTTTCGATTGTCAATAGTTCATGAGGAGGGTTCTTCGGGCATGAGAGCTACTGATGAAGATAATCAAGGGGCCACCCATTCAGGAGTTTTAGAATTCACTGCTGATGAAAGTTCAGTAGGTCTTCCTCCTCATGTGTGGAATAATTTGTTTGCGGATGTTAGTCCTAAGTCTCCATTAGTAGAGGTCCGCTATGTTGGGCTTTCAAAGGGGACTTATGCAAAACTTCAACCTGAAAGGGTAGGATTTTCTGATTTGCCAAATCATAAGGCCGTCCTTGAAACAAGTCTTCGGCAACATGCAACTCTTTCTCAAGGTGATATTTTGACTGTCAACTATGGGGAACTTGCATATAAATTGAGGGTGCTTGAATTGAAACCTTCCTCAAGTGTATCTGTCTTAGAAACAGATATTGAAGTTGACATTGTTGATCCTGATACAAGCTCAGAAAAGAGAGATCAGCATGTTTTACTCCCACTTGAATTCGGGGTGTCAAAATCTGGAATGGTGGATGAAGAAAATTTTGTATACTACAAATTCTCAATAGACAATGGCATCTGGGAGAAAATCATTGCTGACAATTCCAATGTTGAGGTAAAATTGGAAGGTGAGACAGGTAGTGGAGACACTGATCTTTTTATATCTAGACACCCTCTGATATTTCCTACTCGACACCAGCATGAGTGGTCATCGCATGATGTTGGCTCAAAGGCTTTGATTCTTAGCTCTGAGGATAAAAACTTTGGGGCTGGGACGTACAGCATTGGAGTATTTGGATTTAAGAGAACAACCAAATTCAAAATATCAGTGGCAATACAGGAAATTTTCCATCAAAAAATAGGTCGACAAGCATCATCGTCCATGTCATATACAGAGACAGACACTGAACAGTGCCGGAATTGCAAGCATTACATACCTAGTAGGACTATAGCATTGCATGAAGCTTACTGTAGCAGACATAATGTTATATGTCAACATGCTGGTTGTGGAATTGTTCTTAGGATTGAGGAGTCCAAGAACCACATTCACTGTGACAGGTGTGGTAAAGCTTTTCAGCAGGGAGAATTGGAAAAGCACGTGAAGGTTTTCCATGAGCCTCTTCACTGTCCTTGTGGTGTAGTCCTTGAGAAAGAACAAATGGTTGAACACCAAGCTTCAGAGTGTCCCATGCGTTTAATTGCATGCCGCTTTTGTGGTGACATGGTTCAAGCTGGAAGTTCTGCTGTTGACATCCGTGACAAGATCAGAGGGTTAACTGAACATGAGAGTGTTTGTGGATCTAGGACAGCCCCATGTGATTCTTGTGGGCGTTCAGTGATGTTGAAGGACATGGACATTCACCGGATTGCTGTTCATCAGCATGGCTAA 1713 0.432 MDYELRRAREKLEREQKERKEKARLKLERERKAKREARNQREAIEAAQRSRRIDAAEAQQKAEEQMQESLLAGRGVVFYRLLGAVPCQGNGDKIKLPPSCFTELSDQGALDKGPMYFRLSIVHEEGSSGMRATDEDNQGATHSGVLEFTADESSVGLPPHVWNNLFADVSPKSPLVEVRYVGLSKGTYAKLQPERVGFSDLPNHKAVLETSLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVDPDTSSEKRDQHVLLPLEFGVSKSGMVDEENFVYYKFSIDNGIWEKIIADNSNVEVKLEGETGSGDTDLFISRHPLIFPTRHQHEWSSHDVGSKALILSSEDKNFGAGTYSIGVFGFKRTTKFKISVAIQEIFHQKIGRQASSSMSYTETDTEQCRNCKHYIPSRTIALHEAYCSRHNVICQHAGCGIVLRIEESKNHIHCDRCGKAFQQGELEKHVKVFHEPLHCPCGVVLEKEQMVEHQASECPMRLIACRFCGDMVQAGSSAVDIRDKIRGLTEHESVCGSRTAPCDSCGRSVMLKDMDIHRIAVHQHG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3859 570 MobiDBLite consensus disorder prediction 1 49 - -
Prci2g3859 570 Gene3D - 185 258 - -
Prci2g3859 570 Gene3D - 77 183 IPR042299 -
Prci2g3859 570 Pfam Ubiquitin fusion degradation protein UFD1 90 260 IPR004854 GO:0006511
Prci2g3859 570 Gene3D - 275 386 - -
Prci2g3859 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 478 529 IPR013083 -
Prci2g3859 570 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 22 515 IPR004854 GO:0006511
Prci2g3859 570 Coils Coil 5 50 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci2g3859 UFD1 1.5e-46 CL0402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3859 - - gmx:100777384 888.256