LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g3851	ATGTCGGATGACATGCTAGTGCATTTCTCGTCCAACTCTTCCAACCAATCGGATCAGTCATTACCTACTAAGATTGCAAAGCTTGAAGCTCGAATGGTGGGCAAGGCTTCGTCCGCAGTTGCCGCCACTCTTTCGTCTGCCCAGCAGTCAACTTGGTCTTCAGTTCCTTCAGCTGCAAAATTCGGGGGACCTTCCGATGATCTGGCTGGACCCTCCACTTCGAGTGATTCCGATGATGATAATGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAGAAGGTGACCACTCCAAGATTTTTGAACATGTTGAGGTAGTTACTGATGGAAGGCTAGCTAGTTTAGATGTTATGGATGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGTTCGTGGAAGAGGGGGTTCTGGTTCGGGCAGGGGACGTGGTTCCCGAGTTACTGATCAGACCAGAGCACAAATTTCTTCTCCAGCAGTTTTGGCCCCGAATGGTCAGCTTGACAATGCAAGCCATAGAGAGGGAAGACTCAAAGATCAGATTCGCAATGACAATTGCACTTCATTAGAGGAGGAAAATGCATCTTTACGTGAAAAAGTTGTTGCATTGGAGGAGGACCTGCGGAAATCAAAACAAGAGATGTCTGATTATCAGAATCTTTCTTGCCAGTTAGAAAAGGAGCTAAAGGACCTGAAAGATCATGAACAGCAAATGAAGCCTAAGAGGACAAGAATAATATCTGATTTGCTGATATCAGTTTCAAAGTCTGAGAGGCAAGAAGCAAGGTTGAAAGTACGACAAGACTCATTGAGACTGGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCCGAGACCTGGGAAGATGGCCAAGCATTGAAGGATCTTAATGCCCAACTTAAACAATTGATAGAAACGAAAGAGGCTATTGAGCGGCAGCGCAAGTTGTTGAAGAAAAAACAATCTGATAAAGGTGAGGGAACAGATGCAGATACTGGATTACAAGAAGATGAAGTTATCATTCAGGATGAAATCTACAAGTCTCGACTAGCTAGCATTAAACGTGAAGAAGAAGTTATTATGCGGGAGAGGGATCGTTATGAACTAGAAAAGGGAAGGCTAATACGTGAGATGAAGCGCATACGAGATGAGGATGGTTCACGATTTAACAACTTTCAGATTCTGAGCCATCGATATGCTCTGTTAAATCTTCTTGGAAAGGGGGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTAGGGAGTACAATATCCACAAAACCCTGGTGCATCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCGTTTTAGAGTACTGTAGTGGGAAGGATCTTGATGCTGTCCTTAAGGCAACACCTATATTGCCTGAGAGAGAGGCAAGGGTAATTCTAGTTCAGGTTTTTCAAGGCCTCGTTTACTTGAATAAAAGAACGCAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTGGAGGATGATGTGGGATCTCAGGGTATGGAACTAACATCTCAGGGTGCTGGAACTTACTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGTAGGACACCTCTTATATCGTCGAAGGTTGATGTGTGGTCGGCTGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGTCCATTTGGCCATGACCAAACTCAAGAGCGTATCCTACGTGAAGATACAATTATAAAGGCTCGCAAGGTTGAATTCCCTTCTAGACCTACAGTTTCTACTGAGGCAAAGGATTTTATTCGGCGATGTCTGACATATAACCAGGCTGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTTACCTACTCAAAGAAGTGA	2055	0.4302	MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSAVAATLSSAQQSTWSSVPSAAKFGGPSDDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLQEGDHSKIFEHVEVVTDGRLASLDVMDAKVSADVNRKKNVRGRGGSGSGRGRGSRVTDQTRAQISSPAVLAPNGQLDNASHREGRLKDQIRNDNCTSLEEENASLREKVVALEEDLRKSKQEMSDYQNLSCQLEKELKDLKDHEQQMKPKRTRIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGEGTDADTGLQEDEVIIQDEIYKSRLASIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILSHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQVFQGLVYLNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSRTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSTEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g3851	684	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	532	544	IPR008271	GO:0004672\|GO:0006468
	Prci2g3851	684	ProSitePatterns	Protein kinases ATP-binding region signature.	412	435	IPR017441	GO:0005524
	Prci2g3851	684	Coils	Coil	357	391	-	-
	Prci2g3851	684	MobiDBLite	consensus disorder prediction	131	159	-	-
	Prci2g3851	684	MobiDBLite	consensus disorder prediction	1	23	-	-
	Prci2g3851	684	SMART	serkin_6	406	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g3851	684	FunFam	Serine/threonine-protein kinase TOUSLED	397	684	-	-
	Prci2g3851	684	ProSiteProfiles	Protein kinase domain profile.	406	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g3851	684	PANTHER	MIXED LINEAGE PROTEIN KINASE	11	683	-	-
	Prci2g3851	684	Gene3D	Transferase(Phosphotransferase) domain 1	397	684	-	-
	Prci2g3851	684	Coils	Coil	300	330	-	-
	Prci2g3851	684	MobiDBLite	consensus disorder prediction	43	58	-	-
	Prci2g3851	684	SUPERFAMILY	Protein kinase-like (PK-like)	399	680	IPR011009	-
	Prci2g3851	684	MobiDBLite	consensus disorder prediction	68	84	-	-
	Prci2g3851	684	Pfam	Protein kinase domain	407	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g3851	684	Coils	Coil	192	243	-	-
	Prci2g3851	684	MobiDBLite	consensus disorder prediction	43	84	-	-
	Prci2g3851	684	CDD	STKc_TLK	405	678	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g3851	Prci-Chr2	47558772	47570949	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g3851	389	684	MAP Kinase Kinase Kinase	AT3G13530	28.094	2.65e-28	120

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TLK	Prci2g3851		Pkinase	4.1e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g3851	K08864		-	gmx:100789927	1113.6