Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3850 ATGTCGGATGACATGCTAGTGCATTTCTCGTCCAACTCTTCCAACCAATCGGATCAGTCATTACCTACTAAGATTGCAAAGCTTGAAGCTCGAATGGTGGGCAAGGCTTCGTCCGCAGTTGCCGCCACTCTTTCGTCTGCCCAGCAGTCAACTTGGTCTTCAGTTCCTTCAGCTGCAAAATTCGGGGGACCTTCCGATGATCTGGCTGGACCCTCCACTTCGAGTGATTCCGATGATGATAATGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAGAAGGTGACCACTCCAAGATTTTTGAACATGTTGAGGTAGTTACTGATGGAAGGCTAGCTAGTTTAGATGTTATGGATGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGTTCGTGGAAGAGGGGGTTCTGGTTCGGGCAGGGGACGTGGTTCCCGAGTTACTGATCAGACCAGAGCACAAATTTCTTCTCCAGCAGTTTTGGCCCCGAATGGTCAGCTTGACAATGCAAGCCATAGAGAGGGAAGACTCAAAGATCAGATTCGCAATGACAATTGCACTTCATTAGAGGAGGAAAATGCATCTTTACGTGAAAAAGTTGTTGCATTGGAGGAGGACCTGCGGAAATCAAAACAAGAGATGTCTGATTATCAGAATCTTTCTTGCCAGTTAGAAAAGGAGCTAAAGGACCTGAAAGATCATGAACAGCAAATGAAGCCTAAGAGGACAAGAATAATATCTGATTTGCTGATATCAGTTTCAAAGTCTGAGAGGCAAGAAGCAAGGTTGAAAGTACGACAAGACTCATTGAGACTGGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCCGAGACCTGGGAAGATGGCCAAGCATTGAAGGATCTTAATGCCCAACTTAAACAATTGATAGAAACGAAAGAGGCTATTGAGCGGCAGCGCAAGTTGTTGAAGAAAAAACAATCTGATAAAGGTGAGGGAACAGATGCAGATACTGGATTACAAGAAGATGAAGTTATCATTCAGGATGAAATCTACAAGTCTCGACTAGCTAGCATTAAACGTGAAGAAGAAGTTATTATGCGGGAGAGGGATCGTTATGAACTAGAAAAGGGAAGGCTAATACGTGAGATGAAGCGCATACGAGATGAGGATGGTTCACGATTTAACAACTTTCAGATTCTGAGCCATCGATATGCTCTGTTAAATCTTCTTGGAAAGGGGGGATTCAGTGAGGTTTACAAGCAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTAGGGAGTACAATATCCACAAAACCCTGGTGCATCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCGTTTTAGAGTACTGTAGTGGGAAGGATCTTGATGCTGTCCTTAAGGCAACACCTATATTGCCTGAGAGAGAGGCAAGGGTAATTCTAGTTCAGGTTTTTCAAGGCCTCGTTTACTTGAATAAAAGAACGCAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTGGAGGATGATGTGGGATCTCAGGGTATGGAACTAACATCTCAGGGTGCTGGAACTTACTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGTAGGACACCTCTTATATCGTCGAAGGTTGATGTGTGGTCGGCTGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGTCCATTTGGCCATGACCAAACTCAAGAGCGTATCCTACGTGAAGATACAATTATAAAGGCTCGCAAGGTTGAATTCCCTTCTAGACCTACAGTTTCTACTGAGGCAAAGGATTTTATTCGGCGATGTCTGACATATAACCAGGCTGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTTACCTACTCAAAGAAGTGA 2058 0.4305 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSAVAATLSSAQQSTWSSVPSAAKFGGPSDDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLQEGDHSKIFEHVEVVTDGRLASLDVMDAKVSADVNRKKNVRGRGGSGSGRGRGSRVTDQTRAQISSPAVLAPNGQLDNASHREGRLKDQIRNDNCTSLEEENASLREKVVALEEDLRKSKQEMSDYQNLSCQLEKELKDLKDHEQQMKPKRTRIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGEGTDADTGLQEDEVIIQDEIYKSRLASIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILSHRYALLNLLGKGGFSEVYKQAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQVFQGLVYLNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSRTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSTEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3850 685 ProSiteProfiles Protein kinase domain profile. 406 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3850 685 CDD STKc_TLK 405 679 - -
Prci2g3850 685 PANTHER MIXED LINEAGE PROTEIN KINASE 11 684 - -
Prci2g3850 685 Coils Coil 357 391 - -
Prci2g3850 685 MobiDBLite consensus disorder prediction 131 159 - -
Prci2g3850 685 MobiDBLite consensus disorder prediction 1 23 - -
Prci2g3850 685 Coils Coil 300 330 - -
Prci2g3850 685 SUPERFAMILY Protein kinase-like (PK-like) 399 681 IPR011009 -
Prci2g3850 685 MobiDBLite consensus disorder prediction 43 58 - -
Prci2g3850 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Prci2g3850 685 MobiDBLite consensus disorder prediction 68 84 - -
Prci2g3850 685 Coils Coil 192 243 - -
Prci2g3850 685 FunFam Serine/threonine-protein kinase TOUSLED 397 685 - -
Prci2g3850 685 Gene3D Transferase(Phosphotransferase) domain 1 397 685 - -
Prci2g3850 685 SMART serkin_6 406 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3850 685 Pfam Protein kinase domain 407 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3850 685 MobiDBLite consensus disorder prediction 43 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3850 Prci-Chr2 47558772 47570950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3850 389 685 MAP Kinase Kinase Kinase AT3G13530 28.000 6.91e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Prci2g3850 Pkinase 3.9e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3850 K08864 - gmx:100789927 1108.98