Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3816 ATGTCCGCCGCGAAGCGCAGCAATTCCTGGACCATTGACACTGACCTCGACGGCATCGACCTTGGCCCCTCCGATTTCGGCTCCTCCATCCCTCTCAAGAAGGTCCCCAACGGCGACGTTTTCTCGGCCTCCCGTGCCGGCGACGTTGACCGCCTCCGCTACCTCCTCGAGTCCGGAGTCAACGTCAATGCTCGGGACCAGTGGGATTCTGTCGCTCTCTACTATGCTTGCCTCGCCGGTCACCTCGATGCTGCTCGCATGTTGCTCGAGAGTGGTGCTATCTGCTCTGAGCACACATTTGACGGTGACCGTTGCCACTACGCTGCCCTTAATTTGAAGGTCAGGAAGTTGTTGAAGGCATTTGAGGCCAGACCGCCGCCTCTGGGTCCCTTGCAGGCGTCGCTGAGAGATACTTTTTTGGGTTGTGCCGCTAATTGGGCCTTCTCGGAGCTTGCTGATTCTCAATTTCAAATTTCGGGTATATCATCAACTCAGGGATCCAATTGCAACCACTTTCCTCCAGATGTGGTTTTCTATGTATCAGGAAGACCTATTGAGGCTCATAGAGTCATATTGAGTGCCAGGTCACCATTTTTCAAGAAAAAGTTTGAGAGTGATTGGAAAGAGCGAAGGGAAGTCAGATTCTCTAAGGAGAAGCTGTCCTATCCTGCTCTCTATAGCCTCTTGCACTTCTTTTATTCTGACAGATTAGAGATTGCTGTAGATGACATGGAAGATCTTGTGAGAATCTGTAAAGTATGCAAATGCGAATCACTACAGAGAATTCTGGAGAAAGAACTAATTCATCAAAAATATGCAGAGTATAAAGCGCTGAGAGATTTGGACAACTCTCAAAAACGGTTCATTTTACAGGGTTTATCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCATTGCATCAGATTCTTCTGATTGCTCTTTCAAATTCAACTCAAGAAAGTGATCTAAATGATGGAATTGATAAAATGGTTTACCGGGTGGGTGCATTGCAGATTGCTAATTCAATGAATGATCTTGCAGATGTTTGTATAAGAGTAGATGAAAAAATATTTCGCTGCCATCAAGTTATTTTAGCATCAAGGTCAGAATACTTCAAAGCAAGATTGTCACGTATACAGGACTTCTATGAAGGGAAAGATGAGTCATCCGTTGTTTCCCTTCCTTTTCTTGAAGAACGTGATTTGAGCAAGGAAGCATTTGAGAAAATGATTGAGTATATGTACACTGACGGTCTGAAGGATATCAGTCCAGATCAGGCAGGGGAAATGTTTGATGCTGCTTCTAGATATTTACTGTTTCCTCTAAAGCGTGCTGTGGCTGATGCACTGCTGCCACACTTGGAAATGGTTTCACCTGCAGAACTTTGCCATTGGTTGATACTGGCAGACATCTGTGGCTAA 1419 0.4588 MSAAKRSNSWTIDTDLDGIDLGPSDFGSSIPLKKVPNGDVFSASRAGDVDRLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQASLRDTFLGCAANWAFSELADSQFQISGISSTQGSNCNHFPPDVVFYVSGRPIEAHRVILSARSPFFKKKFESDWKERREVRFSKEKLSYPALYSLLHFFYSDRLEIAVDDMEDLVRICKVCKCESLQRILEKELIHQKYAEYKALRDLDNSQKRFILQGLSLPEEDRLPAALHQILLIALSNSTQESDLNDGIDKMVYRVGALQIANSMNDLADVCIRVDEKIFRCHQVILASRSEYFKARLSRIQDFYEGKDESSVVSLPFLEERDLSKEAFEKMIEYMYTDGLKDISPDQAGEMFDAASRYLLFPLKRAVADALLPHLEMVSPAELCHWLILADICG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3816 472 Pfam BTB/POZ domain 170 270 IPR000210 GO:0005515
Prci2g3816 472 Pfam BTB/POZ domain 344 449 IPR000210 GO:0005515
Prci2g3816 472 Gene3D - 40 125 IPR036770 -
Prci2g3816 472 SUPERFAMILY POZ domain 341 452 IPR011333 -
Prci2g3816 472 FunFam BTB/POZ domain-containing protein 34 157 - -
Prci2g3816 472 ProSiteProfiles BTB domain profile. 346 422 IPR000210 GO:0005515
Prci2g3816 472 Pfam Ankyrin repeats (many copies) 41 89 IPR002110 GO:0005515
Prci2g3816 472 Gene3D Potassium Channel Kv1.1; Chain A 335 472 IPR011333 -
Prci2g3816 472 CDD BTB_POZ_ZBTB_KLHL-like 345 436 - -
Prci2g3816 472 SMART BTB_4 346 453 IPR000210 GO:0005515
Prci2g3816 472 SMART BTB_4 174 271 IPR000210 GO:0005515
Prci2g3816 472 ProSiteProfiles BTB domain profile. 174 241 IPR000210 GO:0005515
Prci2g3816 472 ProSiteProfiles Ankyrin repeat profile. 43 67 IPR002110 GO:0005515
Prci2g3816 472 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 11 469 IPR044515 -
Prci2g3816 472 SUPERFAMILY POZ domain 169 269 IPR011333 -
Prci2g3816 472 SUPERFAMILY Ankyrin repeat 42 119 IPR036770 -
Prci2g3816 472 FunFam BTB/POZ domain-containing protein 168 290 - -
Prci2g3816 472 Gene3D Potassium Channel Kv1.1; Chain A 165 289 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3816 Prci-Chr2 47259390 47266155 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci2g3816 BTB 1.8e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3816 K10520 - cave:132182695 791.186