Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3810 ATGAGGAAAAGGGAGCGGGAAAATCCTTGTGGAGTATGCGGCCACTATCACAAATACGAAGAAGGGGAGGTTTGTTCGATTTGCGGCCACCGCATTCCGGCTGCATCGGAGAAGACTTCAATCCGAGTCAGCGCCTTCCCTTCCGAGATTTTACCAGAATTCCTTTACTTGGGCAGCTATGATAACGCATCACGTTCGGAGCTTCTCAAGACTCAGGGAATCTCTCGAATCCTCAATACGGTTCCTTCTTGTCAAAATCTCTATAGAAACTCATTTACCTATCACTGTCTCCCAGATGACAAAACTTTGCCTTTGCCATTTGATGAAGCGATTCAGTTTCTAGAGCAATGTGAGAAGGACAAGGCCCGGGTTCTGGTTCATTGCATGTCAGGGAAGAATAGGTCCCCAGCTATTGTGATTGCTTACCTGATGAAGTCCAAGGGATGGAGACTCCCCCGGAGCTACCAGTGGGTGAAAGAGCGAAGATCATCTGTAGAATTAACTGAAGGTGTTTACCAGCAACTGCAGGAGTATGAACGCAAGATGTATGGATCGGTTGACACTGGCAGCTCTCCTTTGTTTGGGTTCTCAGCTCCAGCAACTCCTCCCATTAGCTTTGGCTACCCACAAATTAATGATCCAGCTGCACCTCTTCCTGCCTTTAGCATTCCTGGCGCTACCTCAATCTTTGCCCAAGCTCCCTTAGACGTGCCCCCAGCTGACTTTACTTTTGGAGCTGGTCAGACTCAAAACAGTGTGATTGGGAGCCCATTTAATGCCAATCCACCAAATCGAACTGGCAGTGACACCCAAATGGATGGTTCTTGA 828 0.4819 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPAASEKTSIRVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYRNSFTYHCLPDDKTLPLPFDEAIQFLEQCEKDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLPRSYQWVKERRSSVELTEGVYQQLQEYERKMYGSVDTGSSPLFGFSAPATPPISFGYPQINDPAAPLPAFSIPGATSIFAQAPLDVPPADFTFGAGQTQNSVIGSPFNANPPNRTGSDTQMDGS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3810 275 Gene3D Protein tyrosine phosphatase superfamily 40 188 IPR029021 -
Prci2g3810 275 FunFam Protein-tyrosine-phosphatase IBR5 36 188 - -
Prci2g3810 275 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 275 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Prci2g3810 275 SMART dsp_5 46 181 IPR020422 GO:0006470|GO:0008138
Prci2g3810 275 ProSitePatterns Tyrosine specific protein phosphatases active site. 126 136 IPR016130 GO:0016311|GO:0016791
Prci2g3810 275 MobiDBLite consensus disorder prediction 241 275 - -
Prci2g3810 275 MobiDBLite consensus disorder prediction 244 275 - -
Prci2g3810 275 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 184 IPR020422 GO:0006470|GO:0008138
Prci2g3810 275 SMART ptp_7 83 187 IPR003595 -
Prci2g3810 275 CDD DSP_plant_IBR5-like 47 178 - -
Prci2g3810 275 Pfam Dual specificity phosphatase, catalytic domain 55 180 IPR000340 GO:0008138|GO:0016311
Prci2g3810 275 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 105 173 IPR000387 GO:0016311|GO:0016791
Prci2g3810 275 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 183 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3810 1 168 Protein tyrosine phosphatase (PTP) family AT2G04550 74.854 7.32e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3810 K04459 - gmx:100806021 457.218