Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3808 ATGGGATTGCAGAATAGCAAAGTTGATGATAGCATGCAAAGGAAATATGATGTGTTTCTCAGTTTCGATGACGAATACATTCCGTATTTTGTTGACGACCTTATTGCTGCTCTACAAAGAAAAGGTATCAATACTTTCAGAGCAGACAAAATGTTGAAGAAAGGAAAATCCGTTCCACCCGAGATCTTGAGAGCAATCGGAGAATCCCAAATTTGCATTGTTGTCTTCACATTTAATTATGCTGCCTCAGTATGGTGCTTGCGGGAATTGGCCAAGATTGCCAAGGACATGAGTAAACACAGGGTTTTTCCAGTTTTCTACCGTGTACATCCAACTGAGGTTCAAAAACAAGGCAAGTGTTATGAAGGCACCTTTGCCGAACATGAAGAAAAATTTAGACACAATTTAGACGAGGTACAAAACTGGAGGCAAGCTATGAAAGAAGTGGGCTCTGTCAAGGGTTGGCATGTATGGAATGGTTCCGAATCAGAAGTTATTGATAGCATTGTTAAAAGCGTGATGAGGACATTAGATCGTAATGAGAATGATGACTTAATCGGGTTGGTGACTCGTGTAGAAGCATTAAAAGATAACCTTCAAGACTTGAAACCAGATGATGACAGACCTCGTTTTGTAGGAGTTTATGGGATGTCCAGAACAGGGAAGACATGTCTTGCCAAAGCTGTATACGAAGAGATGTCTCACCACTTCAAAGCTCACAGTTTTCTTTTCAACGTAGGTCGAGTTGTTGACAATTATTCTCATGGTCTAATCCACTTACAAAAGCAACTTCTTTGTGAAACTGGAGTCGAAGGTGATCAAGAGATAAATGATGATGAAATGGGAAGCTCAATTATCAGGGATCACTTAAGAAGCTGTAAGACTCTCTTGGTTCTTGATGACATTAATGATCCAGCACAACTAAAGGCTTTGGCTGGAAATGTTGACTGGTTTGGTCCTAGAAGTAGGATTATCATAGCAACAAGAGATGAGAGTGTTCTTAGAAACCATGGGGTGGAACATGTTTACAAGGTCAAATTATTAAACGAGTATGAAGCTAGCCAACTTCTCTGTACAATTGCTTTCAAACGCAATTCTCCCCTTGCAGGTTACGAGAAATTGACGGGTGATGTTTTAAGATATGCCAATGGCCTTCCGTTAGTCATTAAAAGATTGGGTTCAGCTCTGGTTGGCCAAAGTCCCTCAGAATGGACAAGGGTCTTGGAAGGCCTGCAAGAACATCCTGAGAAAAGCATCATGCTTCACCTTAAATCAAGCCTTCATGGACTGAAGAAGGAAGAAATGGAGATATTTTTTGATATTGCTTGTTTCTTCAATGGAGAAGATGAGAGCCATGTCAGGAGAATTTTATATTCTTGCGGACATGATGATAATGGAATTAGAGTTCTACAAGATAAATCACTCATAAACATTAGTGATGGAAAAATTGCTATGCATGTTATACTGCAACAGGTAGGAAGGCAAATAATTCATGAAGAATCATACAGGAATCGTGGCAAAAGAGGTAGGTTATGGTTGATCAAGGATGTTCTTGATGTTATGGACACAGAAAAGGGAATTAAAAGAGTCCAAGCCATAGTCTTGAAGCCGGAAAAACTGCAAGACACTCCTTTGAGGGCCGAAGCTTTATCATACATGAGAGGCCTTGTACTTATGATACTTCATAATGTAAAATTTTCGGGAGAGATCCATCATCTTTCCAATGAATTGCGATATGTTTCGTGGGATAAATATCCTTTCACTCGTTTGCCATCTACTTTTGAAGGTCGAAAGCTTGTTGAATTGATCATGCCTAATAGTAGTCTCAGGCTGCTATGGGAAGGCATTTATAAGGATCTCCCCAATTTGAGAAACTTGGATCTCCATGGCTCCAAATATTTGACCCAGATGCCGAGTTTTGCAGGGCTCCGAAATCTTGAAATTCTTAACCTTGAAGGATGTATTAGACTGTCGCAAGTTGATTCATCTATTACAGCTCTTCATAATATCAGGGAGCTGAATTTGAGAAATTGTGTTGGTCTTGCTAGTATCCCAGAAAGTTTATTTGGTGGTCGTGAAAAACTTAAAATTCTAAATCTTGCTGGGTGCTCAAATCTTTTGAAGTATTTCAACTTTGATCCGTTGAGGAGCTCACTGGATGAGAAGCTACTCACCAATCGATATCATATCTTATTGGCAAAATTCGTATTGTATTTTCATTTGCTTTTCAGGCTAATAAATTAA 2244 0.393 MGLQNSKVDDSMQRKYDVFLSFDDEYIPYFVDDLIAALQRKGINTFRADKMLKKGKSVPPEILRAIGESQICIVVFTFNYAASVWCLRELAKIAKDMSKHRVFPVFYRVHPTEVQKQGKCYEGTFAEHEEKFRHNLDEVQNWRQAMKEVGSVKGWHVWNGSESEVIDSIVKSVMRTLDRNENDDLIGLVTRVEALKDNLQDLKPDDDRPRFVGVYGMSRTGKTCLAKAVYEEMSHHFKAHSFLFNVGRVVDNYSHGLIHLQKQLLCETGVEGDQEINDDEMGSSIIRDHLRSCKTLLVLDDINDPAQLKALAGNVDWFGPRSRIIIATRDESVLRNHGVEHVYKVKLLNEYEASQLLCTIAFKRNSPLAGYEKLTGDVLRYANGLPLVIKRLGSALVGQSPSEWTRVLEGLQEHPEKSIMLHLKSSLHGLKKEEMEIFFDIACFFNGEDESHVRRILYSCGHDDNGIRVLQDKSLINISDGKIAMHVILQQVGRQIIHEESYRNRGKRGRLWLIKDVLDVMDTEKGIKRVQAIVLKPEKLQDTPLRAEALSYMRGLVLMILHNVKFSGEIHHLSNELRYVSWDKYPFTRLPSTFEGRKLVELIMPNSSLRLLWEGIYKDLPNLRNLDLHGSKYLTQMPSFAGLRNLEILNLEGCIRLSQVDSSITALHNIRELNLRNCVGLASIPESLFGGREKLKILNLAGCSNLLKYFNFDPLRSSLDEKLLTNRYHILLAKFVLYFHLLFRLIN 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3808 747 Gene3D Ribonuclease Inhibitor 528 726 IPR032675 -
Prci2g3808 747 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Prci2g3808 747 SUPERFAMILY L domain-like 545 711 - -
Prci2g3808 747 PRINTS Disease resistance protein signature 289 303 - -
Prci2g3808 747 PRINTS Disease resistance protein signature 382 396 - -
Prci2g3808 747 PRINTS Disease resistance protein signature 211 226 - -
Prci2g3808 747 PRINTS Disease resistance protein signature 618 634 - -
Prci2g3808 747 SMART till_3 15 152 IPR000157 GO:0007165
Prci2g3808 747 Gene3D - 14 176 IPR035897 -
Prci2g3808 747 SUPERFAMILY "Winged helix" DNA-binding domain 419 521 IPR036390 -
Prci2g3808 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 709 IPR044974 GO:0006952
Prci2g3808 747 Pfam NB-ARC domain 192 421 IPR002182 GO:0043531
Prci2g3808 747 Gene3D - 347 431 IPR042197 -
Prci2g3808 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 441 IPR027417 -
Prci2g3808 747 Pfam TIR domain 15 178 IPR000157 GO:0007165
Prci2g3808 747 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 155 IPR035897 -
Prci2g3808 747 Gene3D - 177 345 IPR027417 -
Prci2g3808 747 Pfam Leucine Rich Repeat 598 616 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3808 Prci-Chr2 47144834 47150092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3808 11 714 WRKY Transcription Factor Family AT4G12020 29.161 1.15e-74 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3808 - - pcin:129302931 1494.95