Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3804 ATGGGATTGCAGAATAGCAAAGTTGATGATAGCATGCAAAGGAAATATGATGTGTTTCTCAGTTTCGATGACGAATACATTCCGTATTTTGTTGACGACCTTATTGCTGCTCTACAAAGAAAAGGTATCAATACTTTCAGAGCAGACAAAATGTTGAAGAAAGGAAAATCCGTTCCACCCGAGATCTTGAGAGCAATCGGAGAATCCCAAATTTGCATTGTTGTCTTCACATTTAATTATGCTGCCTCAGTATGGTGCTTGCGGGAATTGGCCAAGATTGCCAAGGACATGAGTAAACACAGGGTTTTTCCAGTTTTCTACCGTGTACATCCAACTGAGGTTCAAAAACAAGGCAAGTGTTATGAAGGCACCTTTGCCGAACATGAAGAAAAATTTAGACACAATTTAGACGAGGTACAAAACTGGAGGCAAGCTATGAAAGAAGTGGGCTCTGTCAAGGGTTGGCATGTATGGAATGGTTCCGAATCAGAAGTTATTGATAGCATTGTTAAAAGCGTGATGAGGACATTAGATCGTAATGAGAATGATGACTTAATCGGGTTGGTGACTCGTGTAGAAGCATTAAAAGATAACCTTCAAGACTTGAAACCAGATGATGACAGACCTCGTTTTGTAGGAGTTTATGGGATGTCCAGAACAGGGAAGACATGTCTTGCCAAAGCTGTATACGAAGAGATGTCTCACCACTTCAAAGCTCACAGTTTTCTTTTCAACGTAGGTCGAGTTGTTGACAATTATTCTCATGGTCTAATCCACTTACAAAAGCAACTTCTTTGTGAAACTGGAGTCGAAGGTGATCAAGAGATAAATGATGATGAAATGGGAAGCTCAATTATCAGGGATCACTTAAGAAGCTGTAAGACTCTCTTGGTTCTTGATGACATTAATGATCCAGCACAACTAAAGGCTTTGGCTGGAAATGTTGACTGGTTTGGTCCTAGAAGTAGGATTATCATAGCAACAAGAGATGAGAGTGTTCTTAGAAACCATGGGGTGGAACATGTTTACAAGGTCAAATTATTAAACGAGTATGAAGCTAGCCAACTTCTCTGTACAATTGCTTTCAAACGCAATTCTCCCCTTGCAGGTTACGAGAAATTGACGGGTGATGTTTTAAGATATGCCAATGGCCTTCCGTTAGTCATTAAAAGATTGGGTTCAGCTCTGGTTGGCCAAAGTCCCTCAGAATGGACAAGGGTCTTGGAAGGCCTGCAAGAACATCCTGAGAAAAGCATCATGCTTCACCTTAAATCAAGCCTTCATGGACTGAAGAAGGAAGAAATGGAGATATTTTTTGATATTGCTTGTTTCTTCAATGGAGAAGATGAGAGCCATGTCAGGAGAATTTTATATTCTTGCGGACATGATGATAATGGAATTAGAGTTCTACAAGATAAATCACTCATAAACATTAGTGATGGAAAAATTGCTATGCATGTTATACTGCAACAGGTAGGAAGGCAAATAATTCATGAAGAATCATACAGGAATCGTGGCAAAAGAGGTAGGTTATGGTTGATCAAGGATGTTCTTGATGTTATGGACACAGAAAAGGGAATTAAAAGAGTCCAAGCCATAGTCTTGAAGCCGGAAAAACTGCAAGACACTCCTTTGAGGGCCGAAGCTTTATCATACATGAGAGGCCTTGTACTTATGATACTTCATAATGTCGAAAGCTTGTTGAATTGA 1710 0.3982 MGLQNSKVDDSMQRKYDVFLSFDDEYIPYFVDDLIAALQRKGINTFRADKMLKKGKSVPPEILRAIGESQICIVVFTFNYAASVWCLRELAKIAKDMSKHRVFPVFYRVHPTEVQKQGKCYEGTFAEHEEKFRHNLDEVQNWRQAMKEVGSVKGWHVWNGSESEVIDSIVKSVMRTLDRNENDDLIGLVTRVEALKDNLQDLKPDDDRPRFVGVYGMSRTGKTCLAKAVYEEMSHHFKAHSFLFNVGRVVDNYSHGLIHLQKQLLCETGVEGDQEINDDEMGSSIIRDHLRSCKTLLVLDDINDPAQLKALAGNVDWFGPRSRIIIATRDESVLRNHGVEHVYKVKLLNEYEASQLLCTIAFKRNSPLAGYEKLTGDVLRYANGLPLVIKRLGSALVGQSPSEWTRVLEGLQEHPEKSIMLHLKSSLHGLKKEEMEIFFDIACFFNGEDESHVRRILYSCGHDDNGIRVLQDKSLINISDGKIAMHVILQQVGRQIIHEESYRNRGKRGRLWLIKDVLDVMDTEKGIKRVQAIVLKPEKLQDTPLRAEALSYMRGLVLMILHNVESLLN 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3804 569 Gene3D - 12 174 IPR035897 -
Prci2g3804 569 Gene3D - 175 345 IPR027417 -
Prci2g3804 569 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Prci2g3804 569 Gene3D - 347 431 IPR042197 -
Prci2g3804 569 SMART till_3 15 152 IPR000157 GO:0007165
Prci2g3804 569 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 536 IPR044974 GO:0006952
Prci2g3804 569 Pfam TIR domain 15 178 IPR000157 GO:0007165
Prci2g3804 569 PRINTS Disease resistance protein signature 211 226 - -
Prci2g3804 569 PRINTS Disease resistance protein signature 289 303 - -
Prci2g3804 569 PRINTS Disease resistance protein signature 382 396 - -
Prci2g3804 569 PRINTS Disease resistance protein signature 551 567 - -
Prci2g3804 569 Pfam NB-ARC domain 192 421 IPR002182 GO:0043531
Prci2g3804 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 441 IPR027417 -
Prci2g3804 569 SUPERFAMILY "Winged helix" DNA-binding domain 419 521 IPR036390 -
Prci2g3804 569 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3804 Prci-Chr2 47144831 47149691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3804 210 512 WRKY Transcription Factor Family AT5G45050 38.562 6.01e-54 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3804 - - pcin:129302931 1129.39