Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3769 ATGAAAGTGGAAGAACTCCAATTCGAATTCAATCATCACCTCCACCACCAGCAGCGGCGGAGTAAAGAGAAGACCCAATTGGGTGTTGCCGAACTCTCGTCGCCTATCTTCTCTGCCGACGATAGTGGCTGTTTTGAGGAGGTCAATGACGGCGAAGCCGAAGATTGTTTCGTCCAGCCCATCAATTTCGCGATGGTAGATAACGGCATTTTCCGGTCCGGCTTCCCTCGCCCTGCCAACTTCTCCTTCCTCAAATCCCTCGGTCTCCGCTCCATCGTATATCTCTGTCCCGAGCCGTATCCGGAGGAAAGCTTGGACTTCTTGAAGTCAAATGGGATCAAGCTTCATCAATTTGGGATTGACGGTCGAAAGGAGCCTTTTGTAACCATCCCAGAGGACACAATATGTCAAGCACTAAGAGTTGTCCTCGATGAGAAGAACCACCCAGTTTTAATTCACTGTAAACGGGGCAAGCACCGAACGGGTTGTGTGGTTGGCTGCTTCAGAAAGTTACAAAAATGGTGCCTGTCATCAGTGTTTGATGAGTACCTGCGCTTTGCAGCTGCCAAGGCAAGAGTTTCAGATATGAGATTCGTGGAATCCTTCGATACTTCCAGCTTGTTGGCGCATTTGCCCATGTCGTTTTCATTTTCACAGAGGTGA 663 0.4917 MKVEELQFEFNHHLHHQQRRSKEKTQLGVAELSSPIFSADDSGCFEEVNDGEAEDCFVQPINFAMVDNGIFRSGFPRPANFSFLKSLGLRSIVYLCPEPYPEESLDFLKSNGIKLHQFGIDGRKEPFVTIPEDTICQALRVVLDEKNHPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYLRFAAAKARVSDMRFVESFDTSSLLAHLPMSFSFSQR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3769 220 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
Prci2g3769 220 PANTHER TYROSINE-PROTEIN PHOSPHATASE 49 207 - -
Prci2g3769 220 Pfam Tyrosine phosphatase family 58 208 IPR004861 -
Prci2g3769 220 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 215 IPR020422 GO:0006470|GO:0008138
Prci2g3769 220 CDD PFA-DSP_Siw14 57 203 - -
Prci2g3769 220 FunFam probable tyrosine-protein phosphatase At1g05000 56 206 - -
Prci2g3769 220 Gene3D Protein tyrosine phosphatase superfamily 56 206 IPR029021 -
Prci2g3769 220 PRINTS Plant and fungal dual specificity phosphatase signature 113 127 IPR020428 GO:0016791
Prci2g3769 220 PRINTS Plant and fungal dual specificity phosphatase signature 130 144 IPR020428 GO:0016791
Prci2g3769 220 PRINTS Plant and fungal dual specificity phosphatase signature 94 107 IPR020428 GO:0016791
Prci2g3769 220 PRINTS Plant and fungal dual specificity phosphatase signature 57 74 IPR020428 GO:0016791
Prci2g3769 220 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 58 202 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3769 Prci-Chr2 46975859 46980179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3769 46 220 Protein tyrosine phosphatase (PTP) family AT4G03960 67.429 4.36e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3769 K18045 - gmx:100799968 285.804