LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g3769	ATGAAAGTGGAAGAACTCCAATTCGAATTCAATCATCACCTCCACCACCAGCAGCGGCGGAGTAAAGAGAAGACCCAATTGGGTGTTGCCGAACTCTCGTCGCCTATCTTCTCTGCCGACGATAGTGGCTGTTTTGAGGAGGTCAATGACGGCGAAGCCGAAGATTGTTTCGTCCAGCCCATCAATTTCGCGATGGTAGATAACGGCATTTTCCGGTCCGGCTTCCCTCGCCCTGCCAACTTCTCCTTCCTCAAATCCCTCGGTCTCCGCTCCATCGTATATCTCTGTCCCGAGCCGTATCCGGAGGAAAGCTTGGACTTCTTGAAGTCAAATGGGATCAAGCTTCATCAATTTGGGATTGACGGTCGAAAGGAGCCTTTTGTAACCATCCCAGAGGACACAATATGTCAAGCACTAAGAGTTGTCCTCGATGAGAAGAACCACCCAGTTTTAATTCACTGTAAACGGGGCAAGCACCGAACGGGTTGTGTGGTTGGCTGCTTCAGAAAGTTACAAAAATGGTGCCTGTCATCAGTGTTTGATGAGTACCTGCGCTTTGCAGCTGCCAAGGCAAGAGTTTCAGATATGAGATTCGTGGAATCCTTCGATACTTCCAGCTTGTTGGCGCATTTGCCCATGTCGTTTTCATTTTCACAGAGGTGA	663	0.4917	MKVEELQFEFNHHLHHQQRRSKEKTQLGVAELSSPIFSADDSGCFEEVNDGEAEDCFVQPINFAMVDNGIFRSGFPRPANFSFLKSLGLRSIVYLCPEPYPEESLDFLKSNGIKLHQFGIDGRKEPFVTIPEDTICQALRVVLDEKNHPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYLRFAAAKARVSDMRFVESFDTSSLLAHLPMSFSFSQR	220

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g3769	220	ProSitePatterns	Tyrosine specific protein phosphatases active site.	152	162	IPR016130	GO:0016311\|GO:0016791
	Prci2g3769	220	PANTHER	TYROSINE-PROTEIN PHOSPHATASE	49	207	-	-
	Prci2g3769	220	Pfam	Tyrosine phosphatase family	58	208	IPR004861	-
	Prci2g3769	220	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	62	215	IPR020422	GO:0006470\|GO:0008138
	Prci2g3769	220	CDD	PFA-DSP_Siw14	57	203	-	-
	Prci2g3769	220	FunFam	probable tyrosine-protein phosphatase At1g05000	56	206	-	-
	Prci2g3769	220	Gene3D	Protein tyrosine phosphatase superfamily	56	206	IPR029021	-
	Prci2g3769	220	PRINTS	Plant and fungal dual specificity phosphatase signature	113	127	IPR020428	GO:0016791
	Prci2g3769	220	PRINTS	Plant and fungal dual specificity phosphatase signature	130	144	IPR020428	GO:0016791
	Prci2g3769	220	PRINTS	Plant and fungal dual specificity phosphatase signature	94	107	IPR020428	GO:0016791

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g3769	Prci-Chr2	46975859	46980179	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g3769	46	220	Protein tyrosine phosphatase (PTP) family	AT4G03960	67.429	4.36e-83	244

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g3769	K18045		-	gmx:100799968	285.804

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