Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3732 ATGGCTAAATCTTACTGGGTTTCTCTGATTCTGTTGATATTCTTGAATTATCAGATTCCTTCACAAGCTCAGCAAGAGTACGTCAACAACAAGCAGCTCGACTGCGACAGCGGCGTCGTCTACAATGCCACCTTCGGCAATCTCTGCAATGGCGTCTCTCGTTCCTGCAATTCTTACCTCACTTTCCGATCAATCGCTCCTTACAACACTCCTCCCACCATAGCCTTTCTCTTGAGTTCCACAGCCTCTGCTATCGCCACCGCCAACAACATCTCCGACGTTGCCCTCATCCCCGACAACACCATGGTCATCGTCCCCGTCAACTGCTCCTGCTCCGGCAAGTACTACCAGCACAACGCCTCCTACGTCTTGAAGCAACATGGAGAGACATATTTCAGTGTTGCCAATAATACCTATCAGGCCCTCACTACTTGTCAAGCTATTGAGAATCAGAACGTTTATGATAAGCGGAATCTCAGTGCTGGCATGAATTTGAGTGTGCCTCTTCGGTGTGCCTGTCCCACGACGAAGCAGGAAGATTCTGGGTTTAAGTATTTGCTAACCTATTTGGTTGCTCAAGGAGAATCGGTGTCTGGTATTGGTAGTCTATTTGGGATCGATGAACAGAGCGTTCTGGATGCCAACGAGCTTTCTGACAGTGCTTTTATTTTCTATTTCACTCCGATTATGGTTCCTCTGACAAAAGTGCCCGACCCAATCAAGCTAGCGGCCTCCCCTCCTCCTCCTCCGCCGCCTTCTACAGCGGCGGCCTCTAACGACTCTAGCTCTTCCAAGAAATGGGTCATCGTCGGGGTCGCGATCGGAGCTGTTCTTATTCTTCTTCTCGGCCTGTCGGGATTTCTCTTCTGGTATTGCCGCCGCCGCAGCCACCAGTGGAAATCTCAGCTGCCTTCTTCCGCTCCGACATCTACCGACATCACCAAGAAGACCGCAGACTCCGGCACGACCCGGTCTTGGTCTATTTCTTCGGAGGGGCTTCGCTACGCCATTGATTCGTTGACGGTTTACAAATTCGAGGATTTGCAGAAAGCGACGAGTTTCTTCAGCGAAGCTAACCAGATCAAAGGATCTGTATACAGAGCAACGTTTAAAGAAGACGCCGCCGCCGTTAAAATCTATAAAGGCGACGTGTCGAAAGAGATCAGCATTCTGAAGCGACTCAACCACACCAACATCACGAGGCTCTCTGGCTTCTGTGTACACAAAGGAGACACCTATCTTGTTTACGAGTTCGCCGAGAATGGCTCACTCGACGACTGGCTTCATCCTAACAACGACAAAAGCAAAAACAAGTTTCAGAATTCATTGTCGACTCTGAATTGGAGACAGAGGGTTCAGATTGCTCATAATATAGCTGATGCATTGAATTACCTTCACAACTACACCAACCCTCCTCATATCCACAAGAATCTCCAGAGCGGGAATGTGCTTCTGGACGAGAATTTCAGAGCTAAAGTTTCCAACTTTGGATTAGCAAGAGTGTTGGATGATGACGAAGAAGGTGGGTTCCAAGTGACGAGGCATGTGATAGGTACACAAGGGTATATGGCACCAGAGTACATCGAGAACGGAGTGATAACTGCGAAAATGGACGTTTTCGCATTTGGGGTTGTGATTCTGGAGCTGATATCAGGGAAGGAAGCCATTGTTGGGGAGGAGAAGCTTCTGTCATCGTGTGCGAGGGAGGTGCTTGAAGGAGAGAATGTGAGGGAGAAACTTCGAGGCTTTGTGGATCCAAGTTTTGGGGATGAATACCCTCTGGATTTGGTATACTCAATGGCACAGCTTGCTAAACGCTGCGTTGAACGAGACATCAATTCGCGACCAGGCATTTCTGAGGTGTTCATGACACTGTCCAAGCTTCAATCATCTACGGTTGATTGGGATCCTTCTGATGAGCTTGACAGGTCCAGATCTGTCAGCAAAGTGTCTGATGCCAGATAG 1965 0.4875 MAKSYWVSLILLIFLNYQIPSQAQQEYVNNKQLDCDSGVVYNATFGNLCNGVSRSCNSYLTFRSIAPYNTPPTIAFLLSSTASAIATANNISDVALIPDNTMVIVPVNCSCSGKYYQHNASYVLKQHGETYFSVANNTYQALTTCQAIENQNVYDKRNLSAGMNLSVPLRCACPTTKQEDSGFKYLLTYLVAQGESVSGIGSLFGIDEQSVLDANELSDSAFIFYFTPIMVPLTKVPDPIKLAASPPPPPPPSTAAASNDSSSSKKWVIVGVAIGAVLILLLGLSGFLFWYCRRRSHQWKSQLPSSAPTSTDITKKTADSGTTRSWSISSEGLRYAIDSLTVYKFEDLQKATSFFSEANQIKGSVYRATFKEDAAAVKIYKGDVSKEISILKRLNHTNITRLSGFCVHKGDTYLVYEFAENGSLDDWLHPNNDKSKNKFQNSLSTLNWRQRVQIAHNIADALNYLHNYTNPPHIHKNLQSGNVLLDENFRAKVSNFGLARVLDDDEEGGFQVTRHVIGTQGYMAPEYIENGVITAKMDVFAFGVVILELISGKEAIVGEEKLLSSCAREVLEGENVREKLRGFVDPSFGDEYPLDLVYSMAQLAKRCVERDINSRPGISEVFMTLSKLQSSTVDWDPSDELDRSRSVSKVSDAR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3732 654 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Prci2g3732 654 Gene3D Phosphorylase Kinase; domain 1 317 418 - -
Prci2g3732 654 MobiDBLite consensus disorder prediction 302 325 - -
Prci2g3732 654 Pfam Protein tyrosine and serine/threonine kinase 380 623 IPR001245 GO:0004672|GO:0006468
Prci2g3732 654 FunFam PTI1-like tyrosine-protein kinase 3 419 639 - -
Prci2g3732 654 ProSiteProfiles Protein kinase domain profile. 276 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3732 654 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 638 - -
Prci2g3732 654 Gene3D Transferase(Phosphotransferase) domain 1 419 647 - -
Prci2g3732 654 SMART LysM_2 188 232 IPR018392 -
Prci2g3732 654 SMART LysM_2 121 168 IPR018392 -
Prci2g3732 654 MobiDBLite consensus disorder prediction 633 654 - -
Prci2g3732 654 MobiDBLite consensus disorder prediction 636 654 - -
Prci2g3732 654 Pfam LysM domain 189 224 IPR018392 -
Prci2g3732 654 SUPERFAMILY Protein kinase-like (PK-like) 327 622 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3732 Prci-Chr2 46695982 46698373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3732 7 647 Receptor kinase-like Gene Family AT2G33580 52.577 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci2g3732 PK_Tyr_Ser-Thr 4.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3732 - - gmx:100818534 792.341