Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3729 ATGAATGATGATGAGTGTCTTCAACTCTTTTGTCAAAAAGCATTTAGAAGAGATCAACCAAAAAAGAGTTTTTCGGAATTGTCTAAATTAGTAATTAATTATTCAAATGGCCTTCCTTTGGCTCTATGTGTTTTTGGTTCCTTCTTTTCAGGACGAAGGGGAATTGAATGGGAAGATGCTTTGGATATGTTGAAAAAGTACTCAAATAATGATGTTTTCAAGATACTTAGATTAAGTTATGTTGCATTAAACCATGTGGAAAAAACAATATTTTTGGATATTGCCTGTTTTTTTAATATGTGGGGCAAGGATGAAGTAACACAAATATTGGTAAGCTGTGGTTTTGAGGCAACAATTGGTATGAAAAATCTTATTGACAAATCATTGCTAGTTGAAATTGAGCTCGGTAATATCAAGTACATAAAGATGCATGATTTGGTTCAACAAATGGGTAGACTTATTGTTTTTGATGAATCTCGTGATGTTGTTGCTAGGCGTAGTAGATTGTGGTTTTCTCATGACATTGATCAAGTACTAAATAGAAATACGGGAACTAAAGCAACAGAAGGTGTGGTTTTGCCCTTCACCTTTGCAAAAGATGAAGCAAATTGGAATCCTGTATCTTTCTTAAGGATGCGTCAGCTTCGATTATTCATCATATCATGTAAATTTAACCTTCCTCGTGGTCTCATGGGCTTTCCTTGGACATTAAAAGTTCTTCATTGGTATGGATATCCTCTCAGAGATCTTCCGTTGAATGTGAAACTTTATGAACTTGTATATCTCAAGATGCACAATAGCAAAATAAAGCGACTTTCTCACGGTACACAATTTATGGAGAATCTAAAGATCTTGGACTTGAGCCATTCCAAAGACCTCATTGAAAGTCCAGAATTTTATGGACTCCGAAATTTAGAAAGGTTAGTCCTTGAAGGTTGCACAAAACTTTTTGCAATTCATCCTTCGCTTGGACAACACCAACGACTTCTTGTGGCAAATTTGAAAGGTTGTGTGAATCTAAAAAGTCTTCCGAGACAATTGGAAATGACATGTCTAATAGAATTTGTTCTAGAAGAGACTGGCATAGTAGATCTTCCTGACACACTTGGATCCCTAACTAGTGTTGAAGTTTTGAATTTTAGAAGTTGCAGAAATCTTCAATTCCTCCCAAGAAAATTGGACATGAATTCTTTGAAGGAATTTGTTCTTTGTGGATGCACACTAGTTAGAAATCTTCCAGAATTTGGGGAAAATATGAAAAATCTCATAACACTTGATGTCCAAGAGACAAGTATAGCGAAGCTTCCTGAATCTCTTGGATCTTTAGCTAGTCTCCAAACTTTGAATTCAAGGGATTGCAAATATCTTGTTGGCCTTCCCTCTAATTTTCACAAATTGAAACACTTGAAAGTTCTCAATATTTCTGGTTGTTCAGCTTTTTGTAAATTGCCAGAAAACATTAACGAAAATGAAGCCTTGGAAATTCTTGATGCTAGCAAAACTGCCATAACAGAAGTACCTTCTTCCATTGGTCATTTACAAGGACTCAAGACACTGTTATTTCATGGATGCTGTTCTGGTCCTAAGGGCTTAACGTTGCCTGATTCTATCTTCAATCTTAAATCATTGACAAATTTAGATTTAAGCAACTGCAATATTGATGATAGAATCATTCATTTCGATCTCGGTGGCCTATCATCATTGAAGAAATTAGATCTAAGTGGAAACATGTTTGTAAATCTACCAGCTAGCTGCATCTCTAATCTTTTGGATCTACAATTTCTTTATTTGAATTCTTGCCCAAGGCTCCAATTGTTGCCACAGCCTTCACCAGGTTTAAATCTAATGGATGCAGGAGATTGTGCTTCACTGACTGCTCTGTCAGATGTAAAATTGTTGCATCTCTTTGCTTCACTTAACCAGAGTGGACAATATGCTAAAAGGCTATCGCATAGATTGAATGCTGATTCATTGGCATCACTATCATTCCAAGCCTTGTTAGTTAGTATTCCAGGGAGGGAGATACCATCGTGGTTTGAGAACCAAAACTATCTTTCCGAATCTAAAAGTTCAATAATACTAGACATCCCTCCATGTGAATGGCTTGGATTTGTGTTATGCATTGTGCTAGAAGATGACATGTTCTATTCCACTGAGGCCTTTGGACTCTCTCTTCTTGCAAAAGCTTCCAATGGTGATATTGTATTCCTTCATGGAACTGGACGTGAACTTGAGAAAGAAATAAGTTCACCTCACTTGTGGATCCTATTCGGGCAAATTGGAAGGCAAAGTGGTGCGCGTTTCTCAATGGATTACAACCAGCTCCTCTTGAAATTTGAAGCTCGAAAGAATGATGTACTGAGTTCCATTAAGTGTGGGTGGCGGCTCATGGACAAAATAGATTTTGAAAACCTCCTTTCAACTGTGCAAGAGCTTGAGGATCAAGAAAACGTAAGGTCCTCCGATGTTGAAGAACAAAGACACTGTTATTCTTCAGTGAGTGTGAGCCACCGAACCATAGTCAATGAATGTGAAACCGAGTCTCCAGAGTCTTCTTCTTCACTCTTAGAAAAGGAAAGCAATTTATGTGACTTACCGATGCATTTTAGTACTGACAATGCAAGCCAATGCGAACATAATCATTGTGACTTCGCTCCTGCCATTGCGGATCCAACCATCACAGTGCCCCCCATAGCCATCTATTCACCTTCTTCATCAAATTTCCGTCCATCCGAGAGTGTAACTAGCCAGGCTAATTCAGAAAAAGGGGATGAGGCAGGTACTGCGATTGAATTGGATTGGACAGGTGGTAGTGGCGACAGAGGAGGGAAGAGGAGACTAGTGGGAGTGTTAATGACGGAGAAAGCTTTGGACAACAAGAAGGTGATGAGCATGCTTAGACAAGATTGGAATATGCTAAAAGAGGAGGTGGATATCTTGGAATTAGAAATTAATGCATATCTGTTTACCTTTGAGATTGAGGAGGATTACATTAGGGTATTAAGAAGTAGACCTTGGTACATCTCAGGATGTCTACTGAATATCCAAGAATGGACAGAGTATATAGTGTTATCAGACGGAAGATTCAACATGTCACCTTTCTGGGTACAATTTCATAATGTACCTCTAAGGGCTATGACCGTGAGTAATCTTATGAAATTAGGAAAAAGGATAGGTGAGGTACTAATGGTTGAATGTCCGATTGTTAATGGAAGGATAATTAGGAGTTGTGCAAGGGCAAGGATCAATGTTGATCTAAGTCGCCCACTAGTGACAGGGTTTTGGATTTTGAGACCAGAGCTGCCAAAGCTATGGAGCTCAGTGAGGTATGAAAGACTCGAGAATCTTTGCTGCAAGTGTGGATTTATAGGGCATGATTCGAGAATCTGCAATGCAGAAAGGGAGATGGCAGTGATGGATCCTACAAAACCTATGTATGGTTCATGGCTCAGTGTTAGTCCTGAGAGAAACTGTGATTATGCTATGCATGTTTGTGAACAAGGATGGTTTGAAGTTGTAGGGGGTGGTGAGAAGAAGATGCGATTCAATACTCACAATGCAAGGTACTGTATAGTTAGACAACAGAACTTTGCTCCCGTCATTGCAAATCCAGCCATCACAGCACAGCCGCCTGCTGCCATCGAATCACCTTCTTCATCGAACTGCCATCCACATGAGAGTGTGACTATTGAGTCTCAGGAAGAAATAATTTGCTCTTATGATTCAATTGATGGCATAAAAGTTTCCTCCCCAAAGCAGAATCCTTCATGGGAGAGAAATCCTATTGCTGGTGACACACTTGTGGTTAATACTATTTCCGAGGCCTACTCAATAGAGTCTGAGAAAACAAACCCTGAGAAGATACTTGAAGAACTTTTTCAAGTTCCAGACTTAGAAGACACTGAGTTGCTGCAAACATATGATATGCTGACCAGTGATGGAAGAAAATATGAGTTATTTAAGTCTCTTCCTATGCGATTAAGAAAACCTTGGATTTTAATGCAAATTAAAAAATATTTAAGTTAA 4026 0.387 MNDDECLQLFCQKAFRRDQPKKSFSELSKLVINYSNGLPLALCVFGSFFSGRRGIEWEDALDMLKKYSNNDVFKILRLSYVALNHVEKTIFLDIACFFNMWGKDEVTQILVSCGFEATIGMKNLIDKSLLVEIELGNIKYIKMHDLVQQMGRLIVFDESRDVVARRSRLWFSHDIDQVLNRNTGTKATEGVVLPFTFAKDEANWNPVSFLRMRQLRLFIISCKFNLPRGLMGFPWTLKVLHWYGYPLRDLPLNVKLYELVYLKMHNSKIKRLSHGTQFMENLKILDLSHSKDLIESPEFYGLRNLERLVLEGCTKLFAIHPSLGQHQRLLVANLKGCVNLKSLPRQLEMTCLIEFVLEETGIVDLPDTLGSLTSVEVLNFRSCRNLQFLPRKLDMNSLKEFVLCGCTLVRNLPEFGENMKNLITLDVQETSIAKLPESLGSLASLQTLNSRDCKYLVGLPSNFHKLKHLKVLNISGCSAFCKLPENINENEALEILDASKTAITEVPSSIGHLQGLKTLLFHGCCSGPKGLTLPDSIFNLKSLTNLDLSNCNIDDRIIHFDLGGLSSLKKLDLSGNMFVNLPASCISNLLDLQFLYLNSCPRLQLLPQPSPGLNLMDAGDCASLTALSDVKLLHLFASLNQSGQYAKRLSHRLNADSLASLSFQALLVSIPGREIPSWFENQNYLSESKSSIILDIPPCEWLGFVLCIVLEDDMFYSTEAFGLSLLAKASNGDIVFLHGTGRELEKEISSPHLWILFGQIGRQSGARFSMDYNQLLLKFEARKNDVLSSIKCGWRLMDKIDFENLLSTVQELEDQENVRSSDVEEQRHCYSSVSVSHRTIVNECETESPESSSSLLEKESNLCDLPMHFSTDNASQCEHNHCDFAPAIADPTITVPPIAIYSPSSSNFRPSESVTSQANSEKGDEAGTAIELDWTGGSGDRGGKRRLVGVLMTEKALDNKKVMSMLRQDWNMLKEEVDILELEINAYLFTFEIEEDYIRVLRSRPWYISGCLLNIQEWTEYIVLSDGRFNMSPFWVQFHNVPLRAMTVSNLMKLGKRIGEVLMVECPIVNGRIIRSCARARINVDLSRPLVTGFWILRPELPKLWSSVRYERLENLCCKCGFIGHDSRICNAEREMAVMDPTKPMYGSWLSVSPERNCDYAMHVCEQGWFEVVGGGEKKMRFNTHNARYCIVRQQNFAPVIANPAITAQPPAAIESPSSSNCHPHESVTIESQEEIICSYDSIDGIKVSSPKQNPSWERNPIAGDTLVVNTISEAYSIESEKTNPEKILEELFQVPDLEDTELLQTYDMLTSDGRKYELFKSLPMRLRKPWILMQIKKYLS 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3729 1341 PRINTS Disease resistance protein signature 35 49 - -
Prci2g3729 1341 PRINTS Disease resistance protein signature 277 293 - -
Prci2g3729 1341 Pfam C-JID domain 670 796 IPR045344 -
Prci2g3729 1341 MobiDBLite consensus disorder prediction 905 923 - -
Prci2g3729 1341 SMART LRR_typ_2 565 588 IPR003591 -
Prci2g3729 1341 SMART LRR_typ_2 419 442 IPR003591 -
Prci2g3729 1341 SMART LRR_typ_2 302 326 IPR003591 -
Prci2g3729 1341 Pfam NB-ARC domain 2 80 IPR002182 GO:0043531
Prci2g3729 1341 SUPERFAMILY L domain-like 142 524 - -
Prci2g3729 1341 Gene3D Ribonuclease Inhibitor 526 689 IPR032675 -
Prci2g3729 1341 Gene3D Ribonuclease Inhibitor 203 350 IPR032675 -
Prci2g3729 1341 Gene3D Ribonuclease Inhibitor 351 525 IPR032675 -
Prci2g3729 1341 Pfam Domain of unknown function (DUF4283) 945 1080 IPR025558 -
Prci2g3729 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 94 IPR027417 -
Prci2g3729 1341 SUPERFAMILY RNI-like 483 649 - -
Prci2g3729 1341 MobiDBLite consensus disorder prediction 905 925 - -
Prci2g3729 1341 Gene3D - 1 84 IPR042197 -
Prci2g3729 1341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 390 628 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3729 Prci-Chr2 46642982 46652642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3729 448 599 WRKY Transcription Factor Family AT4G12020 36.601 1.04e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3729 - - pcin:129298711 2656.32