Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3728 ATGAACTCAAACATTAGAACTCCAAAATCTTCCAATGGCACTGAGGGTCTAAAAAGCACCACGTCGACCCCAAAATGGAAGTACCATGTTTTCTTGAGTTTTAGGGGTGAAGATACTCGTAAAGGCTTTACAGATCATTTATATGCTGCATTATGTAAAAAGGGATTCAAAACATTTAGGGATGATAACGAACGAGAAGGAGAAGTTATCTCAACAAGTCTCCTCGAAGCAATTAAGGGTTCCCTCTTTGCAATTGTTGTTGTCTCCCAAAATTATGCTTCTTCTTCATGGTGTTTGGATGAGCTTCAACAGATTATTGACCCCGAAAATGAACGGGGTTGTGAAGAAATTTTCCCCATCTTTTATGGTATTGATCCATCCGTTGTAAGGCACCAGAAAGGGAGTTTCGCTGAAGCTTTTGCCAAGCATGAAGAGAAGTTTGGAGAAGAGCAATGGAAGGTGCATAGATGGAGAGATTCTTTAACAATGATTGCTAACATATCTGGTTGGGATTCTAAGGATTGGCATGAATCAGAACTTATTGAAGAGGTAGTTAAATCATTATGGAGCAAATTACGTTCTAAACTGCCATCTTACAATGGTATTCTTGTAGGAATGGACCCGAGGTTGGAAGTTATGGATTCACTACTAGGGATAGGGTTGGATGATGTTCGTTTTGTAGGGATATGGGGAATGGGTGGTGTTGGTAAGACCACTTTGGCTAGTGTTGTCTATGAGAGACTATTAGGCCAGTTTGAAATTTGTTGCTTTCTGGGCAATGTGAGGGAGGTTTCTGAAAAAAGTAATGGCTTGATTGACTTGCAAACAAAAATTCTGTCACAACTCAAGGTAAAGGGCATGATAATTGATAATACTTATGGAGGAAAGAGTACAATCCAAAACCTTTGTTGTAATAAAATGGTTCTCCTTGTCCTTGATGATGTAAACTTGAATAGCCAGTTAGAGAATTTAGCTGGAAGTAAAGACTGGTTTGGTTTAGGGAGCAGAATAATTATAACAACCAGAGATTGCCATTTGTTGAAATCACATGGGGTGCGTCATATATATAAAGCTGAAATCATGAACCAAGATGAATCCCTTGATCTCTTTTATAAGAGAGCCTTTAGAGGAGAACAACCTAAAGAGGCTTATTTGAAGTTATCTGAAGCAGTGGTTAACTATGCTGGAGGCCTTCCTTTGGCACTTCAAGTCTTGGGATCCCTTCTGTATGGAAGAAGTGTGCCTCAATGGGAAGAAACTTTGAATAAATTGAAGCAAGTTCCTGAGAAGGATATATTTAGAATACTGAAAATAAGTTATGATGGATTAGGAGATTCTGAGAAGGCAACATTTCTAGATATTTCTTGTTTCTTTAAGATGTGGGACAAAGACCAGGTAACGCATGTATTGAAAATATGTAGTCTTTATCCATTAAATGATATACCCCTTCTTATTGAGAAGTCTTTGCTATCTGAAGTTGTAGCTAATGGCGGTGTATGTATAGATATGCATGATTTAATTCAAGAAATGGGTAGGCGAATTGTTTTTGAAGAATCTCCAAATATCGGAAAAAGAAGTAGATTGTGGTCTCCCAAGGACATTGATAAAGTATTGAAAAGAAATATGGGGACTGAACTGATCCAAGGTGTAGTTTTCCCCAACAACTCTCAATCATATGGAACATATTGTGATCCTAAAGCCTTTTCAAAAATGCTTAATCTTCGATTACTCATCGTACATGGGAATTTGAACCCTTCTTGTGGCCTCAAATGCCTTTCAAGCGAATTAAAATTTCTACTATGGCATAGATATCCTTTAGAGGCTCTACCGCTTGGGGTCCAGCTAGATGAACTTGTTTATCTTCAAATGCATGATAGCAAATTAAAGAAACTTTGGAATGGTGTGGAATGTTTGGAAAAGCTGGAGTTTATGGATTTGAGCCACTCCAAATACTTGACTAGAACTCCAGATTTTTTGGGTGTTCCAAATCTGGAAAAATTAATTCTTGAAGCTTGTACAAGGCTAGTGAAAATTCATCCTTCATTTGGACAGAACAAAAACCTTCTTGTAGTAAATTTGAAAGGGTGCACAAGTCTTGAATCCCTTCCACAGAAATTGGAAATGACTCTTCTAAGGGAATTTATTCTTTGTGGATGCACTAAAATAAAAAAACTTCCAGAGTTTGGAGAAAATATGGGCAATCTTGTAGCACTTGATCTTGAGGAGACTGCCATAGCAAAATTACCTGCATCTCTTGGATTCTTGACTGGTCTTGAAACTCTGAATGTGAAAGGCTGTAAAAAACTTGTCTGCCTTCCGCACACTATTAAGAATTTGAAGCTCCTTAAAAATCTTGATATTTCTGATTGTCCAAAATTTTCTAAACTACCTGAAAACTTGAATGAAAATGTGGCCTTGGAAAAGCTTGATCTAAGCGGAACTGCCATAACTAACGTACCTTCTTCCATTGGTGAGTTAGAAAAACTCACAGTGCTTTCATTTCATGGATGCAAAGGGATCTCATGGCATTGGTTTCCTAATGAGAGTGTTATATTGCCTCCAATCTTCAAGCTGAAATCACTGACACAACTAGATTTAAGCTTCTGTAATATCGGTGATGAATTCATTCCTGAAGATCTTGGTGGCTTATCATCATTGGAAATATTAGATTTAAGAGGAAACAACTTTATGAATCTACCACGCGGCTGCATTCTGAATCTTTTGAAACTACAATATCTTTATTTAAGATGTTGCCCAAGGCTTCAGTCGTTGCCGCAATCTTCACCTTCCTTAGAACTAATGGATGCAGGAGACTGTGCTTCAATGGAACCAATACTATCAGATGAACAGCTATGGTATCTGTTTGGCTCATTGGTGGATGAGTGTGTCCAATATGCTCAAGCAGCAGTCTGGTCTTATTCATATTTCGAGGGAAAGGTATCAGACTCAGCAGCATTGTTAATTAAAGATTTTGCGGCAACTATTCCAGGAAGAGAAATACCATCATGGTTCGAGAACGAAAATTACTTATCTGTGAGAAAGGGTGGGGAAAGTTCAATAATAATAGATGTCCCTCAATCTAACAGTGCCAGTGATTGGCTAGGATTTGCATTATGCCTGGTTCTAGATGACAAGTTCTATTCCCTTAAGAAAAATGGAAGTCAATTCCGTACACCTTGCTGGTATTATGATTGTGTTAAAGCTTCCGAAGATAATAAGTTTGAATACCTTGTTGGTTGGCAAAGTAAAATTGGGTCAGAAATATATTATCCTCATCTTGGGATCCTGTTTTTGCAAATTACTAAAAAAAACGGTTTGGAATTATCCATGGATTACAACCAGCTTCACTTGAAATTTTATGGTAATTTTCTAGAGTCACAAACATCATATGAAAGATTTCCTCTCAAGTGTCAGTGGCGTCTTATAAGCAAAGAAGATTTTGAGGAGTGGAGAAAAATTAGGGGTCAAAGTCACCTTACGTGGGAAGGCTATGAAGAAAGAGAATCAAGTTCATGCTTGGAAGAGGAAGGCCATCTAGATGAATCATGGATGAGCTTCAATACAGAAGCAAGCATCACACAAGAAGGGGAACAAATGAGAATTTCCAGTTTGAACATGAAAAGGAAAGGAGAAGCCATGCCCGAGCTGTCATCCTCCTTTGATACACCAAATAAGAAATGGAGAACATCAAACATTCATATTAGAGATATCTCGTCATCTAATTGCATAAATGATGACAATGTTGCAAAAATGGTGATTGGATTGAAATCTATTGGTGAAAGTAGTTCTTCGAACTCTAAAAAGTTGAAGAGATGA 3816 0.3771 MNSNIRTPKSSNGTEGLKSTTSTPKWKYHVFLSFRGEDTRKGFTDHLYAALCKKGFKTFRDDNELXEGEVISTSLLEAIKGSLFAIVVVSQNYASSSWCLDELQQIIDPENERGCEEIFPIFYGIDPSVVRHQKGSFAEAFAKHEEKFGEEQWKVHRWRDSLTMIANISGWDSKDWHESELIEEVVKSLWSKLRSKLPSYNGILVGMDPRLEVMDSLLGIGLDDVRFVGIWGMGGVGKTTLASVVYERLLGQFEICCFLGNVREVSEKSNGLIDLQTKILSQLKVKGMIIDNTYGGKSTIQNLCCNKMVLLVLDDVNLNSQLENLAGSKDWFGLGSRIIITTRDCHLLKSHGVRHIYKAEIMNQDESLDLFYKRAFRGEQPKEAYLKLSEAVVNYAGGLPLALQVLGSLLYGRSVPQWEETLNKLKQVPEKDIFRILKISYDGLGDSEKATFLDISCFFKMWDKDQVTHVLKICSLYPLNDIPLLIEKSLLSEVVANGGVCIDMHDLIQEMGRRIVFEESPNIGKRSRLWSPKDIDKVLKRNMGTELIQGVVFPNNSQSYGTYCDPKAFSKMLNLRLLIVHGNLNPSCGLKCLSSELKFLLWHRYPLEALPLGVQLDELVYLQMHDSKLKKLWNGVECLEKLEFMDLSHSKYLTRTPDFLGVPNLEKLILEACTRLVKIHPSFGQNKNLLVVNLKGCTSLESLPQKLEMTLLREFILCGCTKIKKLPEFGENMGNLVALDLEETAIAKLPASLGFLTGLETLNVKGCKKLVCLPHTIKNLKLLKNLDISDCPKFSKLPENLNENVALEKLDLSGTAITNVPSSIGELEKLTVLSFHGCKGISWHWFPNESVILPPIFKLKSLTQLDLSFCNIGDEFIPEDLGGLSSLEILDLRGNNFMNLPRGCILNLLKLQYLYLRCCPRLQSLPQSSPSLELMDAGDCASMEPILSDEQLWYLFGSLVDECVQYAQAAVWSYSYFEGKVSDSAALLIKDFAATIPGREIPSWFENENYLSVRKGGESSIIIDVPQSNSASDWLGFALCLVLDDKFYSLKKNGSQFRTPCWYYDCVKASEDNKFEYLVGWQSKIGSEIYYPHLGILFLQITKKNGLELSMDYNQLHLKFYGNFLESQTSYERFPLKCQWRLISKEDFEEWRKIRGQSHLTWEGYEERESSSCLEEEGHLDESWMSFNTEASITQEGEQMRISSLNMKRKGEAMPELSSSFDTPNKKWRTSNIHIRDISSSNCINDDNVAKMVIGLKSIGESSSSNSKKLKR 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3728 1272 Gene3D - 193 355 IPR027417 -
Prci2g3728 1272 Gene3D - 361 445 IPR042197 -
Prci2g3728 1272 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 171 IPR035897 -
Prci2g3728 1272 Pfam NB-ARC domain 223 441 IPR002182 GO:0043531
Prci2g3728 1272 Gene3D - 20 192 IPR035897 -
Prci2g3728 1272 Gene3D Ribonuclease Inhibitor 724 940 IPR032675 -
Prci2g3728 1272 SMART LRR_typ_2 884 907 IPR003591 -
Prci2g3728 1272 SMART LRR_typ_2 733 756 IPR003591 -
Prci2g3728 1272 SMART LRR_typ_2 805 827 IPR003591 -
Prci2g3728 1272 SMART LRR_typ_2 859 883 IPR003591 -
Prci2g3728 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 455 IPR027417 -
Prci2g3728 1272 Gene3D Ribonuclease Inhibitor 554 723 IPR032675 -
Prci2g3728 1272 SMART till_3 27 168 IPR000157 GO:0007165
Prci2g3728 1272 FunFam Disease resistance protein (TIR-NBS-LRR class) 24 195 - -
Prci2g3728 1272 PRINTS Disease resistance protein signature 303 317 - -
Prci2g3728 1272 PRINTS Disease resistance protein signature 396 410 - -
Prci2g3728 1272 PRINTS Disease resistance protein signature 778 794 - -
Prci2g3728 1272 PRINTS Disease resistance protein signature 227 242 - -
Prci2g3728 1272 SUPERFAMILY L domain-like 504 843 - -
Prci2g3728 1272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 728 IPR044974 GO:0006952
Prci2g3728 1272 Pfam TIR domain 27 199 IPR000157 GO:0007165
Prci2g3728 1272 ProSiteProfiles TIR domain profile. 26 193 IPR000157 GO:0007165
Prci2g3728 1272 SUPERFAMILY L domain-like 796 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3728 Prci-Chr2 46629363 46642100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3728 28 835 WRKY Transcription Factor Family AT4G12020 31.643 8.03e-96 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3728 - - pcin:129302209 2502.63