Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3726 ATGGCACTGAGTGTCCATGAAGCTTCGTCCTCAAACTCTTCTAACTACTATCCAACACCAAAGAAATTTGATGTTTTCTTGAGTTTTAGAGGTGAAGACACTCGTAAAAACTTCATAAGCCACTTGTTTCCTGCATTATGTGATAAAGGATTCAGAGTTTTTAAGGATGATGAAGAGATTAAGAGAGGAGAAGTCATTTCAAAAGAACTCCTACAAGCAATTGAGGACTCTCATTTTGCAGTTGTTGTTCTCTCAAAAAATTATGCCTCTTCTTCATGGTGCTTAAAGGAGCTCCGACATATTATGCATTCAAAAAAAGAATTTTGTCTACAAGTTTTTCCCATTTTTTTAGGTGTAGATCCTTCTGATGTAAGGCGTCAAAGTGGAAGTTTTGCTGAAGCTTTTGCCGAGCATCAAATGCTTCAAAGGAACCACGAGGAGATGGAAAGTTGGAAAGATTCCCTTAAAGAAGTTGCTGGCTTATCTGGTTGGGATTCCAAGGATATGGATGAAGGAGAACTTGTCAAAACGGTGGTTGAGGAGTTATGGACCAAATTACGTGAAAGATTGCCACCTTGTTCGAATGATGTTCGGTTTGTAGGAATTTGGGGCTTAGGGGGTGTGGGTAAGACAACAATCGCAAGGGAGGTTTTTGATAGATATCGTTGCCAATTTGATGTTAGTTGCTTTCTCGCCAATGTTAGGACAACTTCAGAAAGAGATGGCGAGGTTGAGTTACAAAGAAAACTTCTTTCACGTCTCAAAATTAAAAACAAGGAAATTGAAGACGTGTATAAAGGAAAGGAAATAATCCAAAACCATTTTCACAGCAGAAAGGTTCTACTTATCCTTGATGATGTTAGTCATGAAACCCATTTGCAAAATTTAGCAGGCAGCCCGATTTGGTTCGGCAATGGGAGTAGGGTGATCATAACAACTCGAGATTCGCACTTGTTGACATTTCATGGAGTGCGTGTGGTATTTGAGGTTAAAACGATGAACCCAAATGAATCTCTTCAACTCTTTTGTCAGAAAGCATTTGGGGGAGATGAACCTCCAGAGAGTTTTTTGAAGCTGTCTAACGCTGTTTGTGATTATGCTGGAGGGCTTCCTTTAGCTCTCAGTGTCTTGGGTTCCTTATTATATGGAAGAAGTGTGTCTGAATGGAAAGATGCTTTGGATATGTTGAAGAAAGACCCACATAAAGATATTTTCAATGTACTCAGAATAAGTTTTGATGCATTAAGCAATACCGAACAGACAATATTCTTAGATATTGCTTGTTTTTTTAATGGCTTGAGAAAAAATGTAGTAACACAAATATTGACAAATTGCGGTCTTAATTCAACATTTGGGATAACATCTCTTCATCAGAAGTCTTTGCTAAGGGATTATGACAATCATCTAGTGATGCACGATTTGCTAGAACAAATGGGCAGGAGAATTGTTGCTGAGAAATCTCTTAATGAAGGTGTTGGAAATCGAAGCAGATTGTGGTCCAAGGAAGATATTGATCTAGTACTGGAAAACAATTGGGGCACAAAAGAAATACAAGGCATGGTTTCGCCCACATCTTGTGAGGCCTGCTGGGATCCTGAAGCCTTTTCAAGTTTGCTTAACCTCAGACTCTTCATCGTCTCACATGTCAACATTCCCCATGGTCTTAAATGCCTTCCTAGAGCTTTGAAAGTTCTTCACTGGACAAAATATCCCTTAGACACTCTTTCCCATGGAGCCCGACTGGATAATCTTGTTGATCTTAAAATGCGTCATAGCCAATTAAAGAAACTTTGGAGTGAAAGCCCGCGCTTGGAGAAGCTAGAGTTTCTGGACTTGAGTCATTCCAAATTCTTAATTAAGATTCCTAACTTCTCTGAGCTGCCAAAGCTGGTGAAATTAGAGCTTGAAGGTTGTGAAGATGTCGTTGAGATTCATCCTTCACTTGGACAACACAAAGAGCTTCAAGTGTTGAACTTGAAAGCTTGCAAAAATCTCAAGACCCTTCCAAGAAAATTGGAAATGACTTCTCTAAAGGAGCTTGATCTTTATGGGTGCATGAAAGTTAAAAAACTCCCAGAGTTCGGGGAAAATATGAAACACCTAGTGATGCTTGATGCTGGAGAGACAAGTTTAGTCAAACTTCCTGAGTCACTTGGATTATTGACTGGTCTGAGAACATTGAAACTAAGGGGCTGTAGAAATCTTGTTTGCCTTCCTCAGAGCATTCACAATTTGAAACGTCTTGTACTTCTTGATATTTCTGGCTGCTTAAAATTTTCTAAATTGCCAGAAAAACTGAATGAAATTGAATCCTTGGAGGAGCTTGAAGCAAGTGAAATTGATATAGGAGAAGTACCTAGTTCTATTGGTGGTCTAGAAAATCTCAAGACAATATCATTTCGTGGGTGCGAAAGGCCAAAGTCGACCTCTCGGAGCCTGATTCTGCTGTTGAAACACATGTTTTGGAGGCATTCAATTCACGAGGGCTTAATATTGCCTAGTTCAATGTTCAAAATGAAATCACTAAAAAAATTAGATTTAAGCAACCGTGGTATGGTTGATGGATCCATTCCGGGTGACTGGAGCGGCTTACCATCACTGGAGAGATTAGATCTAAGCGGAAACAAGTTTGTGAACCTACCTGATGGCTGCATTTCTAATCTTTTGAATCTACAATTTCTTTGTTTGAATTCCTGTTCAAAACTCAAGTCGTTGCCACAGTGTGGACCAACGTTAAACGCAATGGATGCCGGAGAATGTGCTTCATTGGAAACAATCTCAGGCGAACAATTATTACACCTCTTTGCTTCAATTGATGAACAGGTGGAATGGCCGAGGAGAAGGGAAACATTTGGGGTGACTATTCCAGGGAGTGAAATACCATCATGGTTTGAGAATCAGAATGATGTTTTTCTGGACAAGAGAGGTGAAGCTGTAGTGATGGTAGAGATGCCTCCACGTGAAGAATTTTTAGGAATGGGTCGCGTGGTCTTGCTTCCAGGAAGCTGGCGTGAATTTGAGAAAGAAATAAAATCTGGTCACCTTTGGATCGTGTTTTGGAAACAAAGAGAGGAACTCAGTCATCGACTGCAATTAAGCAAGTACAGCCAGATTCCCCTGAGATTTGAGATCGATGGTAGCAAGCCATATCCACGAGCTCCGATAAAGTGTGGATGGCGTGTCATATGCAAAGGTGATTATGAAAATAGTGGCAACTCAATAGTGCCAATATTGGAACAACACAGGGATGAAGGTGTTCGTACCCCAATGCCCCACAGACGGTTCAGTTCCAATTTTCAGTTTGCTCCTGCTGCCGCTGCACCACCAAGGAATGCCCCTTGGCGGCAATTTTTATGGTGGCTCTTGCTAGATCTTTACGATGGCGGTATATGGGCTGCTAGCGAAAGGTATCTCTTAGACCATCGGGTGATATCTCATGGTGCAAGCTTGCCATCTCATTTTCTTCTTCCTCTGGTTATGTTTGTTTCGCCGGCGTCCATGGTGGTTTTTATTACTTTGGGTCTCACTCTTGATAGATGGTTTTCAACTTCTTTGGTTGCTTCCTTAAAAGGGGTGGGACCTTTGGGTGGTTCTTTGAACCCGTACCCTTTATGGTTCATTTTTCTATTGGTGTCTTTTCTTTCTAATGGATTTCAGTGTGGTAATGGCACTTCTAGTAGCGGCGATGATGACGATGATGGTGACAGCGACTGA 3714 0.4093 MALSVHEASSSNSSNYYPTPKKFDVFLSFRGEDTRKNFISHLFPALCDKGFRVFKDDEEIKRGEVISKELLQAIEDSHFAVVVLSKNYASSSWCLKELRHIMHSKKEFCLQVFPIFLGVDPSDVRRQSGSFAEAFAEHQMLQRNHEEMESWKDSLKEVAGLSGWDSKDMDEGELVKTVVEELWTKLRERLPPCSNDVRFVGIWGLGGVGKTTIAREVFDRYRCQFDVSCFLANVRTTSERDGEVELQRKLLSRLKIKNKEIEDVYKGKEIIQNHFHSRKVLLILDDVSHETHLQNLAGSPIWFGNGSRVIITTRDSHLLTFHGVRVVFEVKTMNPNESLQLFCQKAFGGDEPPESFLKLSNAVCDYAGGLPLALSVLGSLLYGRSVSEWKDALDMLKKDPHKDIFNVLRISFDALSNTEQTIFLDIACFFNGLRKNVVTQILTNCGLNSTFGITSLHQKSLLRDYDNHLVMHDLLEQMGRRIVAEKSLNEGVGNRSRLWSKEDIDLVLENNWGTKEIQGMVSPTSCEACWDPEAFSSLLNLRLFIVSHVNIPHGLKCLPRALKVLHWTKYPLDTLSHGARLDNLVDLKMRHSQLKKLWSESPRLEKLEFLDLSHSKFLIKIPNFSELPKLVKLELEGCEDVVEIHPSLGQHKELQVLNLKACKNLKTLPRKLEMTSLKELDLYGCMKVKKLPEFGENMKHLVMLDAGETSLVKLPESLGLLTGLRTLKLRGCRNLVCLPQSIHNLKRLVLLDISGCLKFSKLPEKLNEIESLEELEASEIDIGEVPSSIGGLENLKTISFRGCERPKSTSRSLILLLKHMFWRHSIHEGLILPSSMFKMKSLKKLDLSNRGMVDGSIPGDWSGLPSLERLDLSGNKFVNLPDGCISNLLNLQFLCLNSCSKLKSLPQCGPTLNAMDAGECASLETISGEQLLHLFASIDEQVEWPRRRETFGVTIPGSEIPSWFENQNDVFLDKRGEAVVMVEMPPREEFLGMGRVVLLPGSWREFEKEIKSGHLWIVFWKQREELSHRLQLSKYSQIPLRFEIDGSKPYPRAPIKCGWRVICKGDYENSGNSIVPILEQHRDEGVRTPMPHRRFSSNFQFAPAAAAPPRNAPWRQFLWWLLLDLYDGGIWAASERYLLDHRVISHGASLPSHFLLPLVMFVSPASMVVFITLGLTLDRWFSTSLVASLKGVGPLGGSLNPYPLWFIFLLVSFLSNGFQCGNGTSSSGDDDDDGDSD 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3726 1237 Gene3D - 170 325 IPR027417 -
Prci2g3726 1237 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci2g3726 1237 ProSiteProfiles TIR domain profile. 21 190 IPR000157 GO:0007165
Prci2g3726 1237 Gene3D Ribonuclease Inhibitor 522 694 IPR032675 -
Prci2g3726 1237 Gene3D Ribonuclease Inhibitor 820 966 IPR032675 -
Prci2g3726 1237 SUPERFAMILY "Winged helix" DNA-binding domain 403 508 IPR036390 -
Prci2g3726 1237 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 164 IPR035897 -
Prci2g3726 1237 Pfam NB-ARC domain 177 402 IPR002182 GO:0043531
Prci2g3726 1237 SMART AAA_5 196 334 IPR003593 GO:0016887
Prci2g3726 1237 SMART till_3 22 161 IPR000157 GO:0007165
Prci2g3726 1237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 693 IPR044974 GO:0006952
Prci2g3726 1237 Gene3D - 2 159 IPR035897 -
Prci2g3726 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 426 IPR027417 -
Prci2g3726 1237 Pfam Leucine Rich Repeat 583 599 IPR011713 -
Prci2g3726 1237 Gene3D Ribonuclease Inhibitor 696 819 IPR032675 -
Prci2g3726 1237 SUPERFAMILY L domain-like 766 908 - -
Prci2g3726 1237 PRINTS Disease resistance protein signature 199 214 - -
Prci2g3726 1237 PRINTS Disease resistance protein signature 274 288 - -
Prci2g3726 1237 PRINTS Disease resistance protein signature 602 618 - -
Prci2g3726 1237 PRINTS Disease resistance protein signature 367 381 - -
Prci2g3726 1237 SMART LRR_typ_2 864 887 IPR003591 -
Prci2g3726 1237 SMART LRR_typ_2 581 604 IPR003591 -
Prci2g3726 1237 SUPERFAMILY L domain-like 528 810 - -
Prci2g3726 1237 Gene3D - 332 416 IPR042197 -
Prci2g3726 1237 FunFam Disease resistance protein (TIR-NBS-LRR class) 334 416 - -
Prci2g3726 1237 Pfam TIR domain 22 191 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3726 Prci-Chr2 46594975 46600823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3726 15 800 WRKY Transcription Factor Family AT4G12020 31.047 3.44e-97 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3726 - - pcin:129302825 2397.85