Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3702 ATGGAAGCAAGCAAAGAGGAGGCGCTTAAAGCAATAGAGATTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGTGCCAAAAATTATGCATTAAAGGCAAAAACAATATGTCCTGAATTGGAGGGGATACCTCAAATGGTGGCCACATTTCAAGTTTATGTAGCTTCTGAGGCAAAATATAATGGCGAACTAGATTATTATTCAATTCTTGGAATAAAACCTTCAGCAGATATAGAGACCGTTAAGAAACAGTACAGGAAGTTGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTGGGAGCTGATGGGGCCTTTAAGCTGGTATCTGAAGCATGGACTTGGCTATCAGATAGTGCCATGCGAAGTTCCTATGATTTCAAGAGAAATGCAAAATTGGCTGCTGGAGTCAATCAGGCAAATTTGTCGTCAGTCCATTCTGCAGGAGCTACAGGTTATAACAAATGTTTCAATTTGTCAACTTCTCATGGTGGGCTGGATTCTTTCTGGACCATCTGCACCTCGTGTAAAGTTCAGTATGAGTATTTGCGCAAGTATGTGAATAAGAGACTTTCATGCAAGAACTGCCGGGGAACTTTTATTGCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCTTTCCCTTATACTCCTTGGTCATATGTGCCAGGCAATGGGTATGGAGGTCATTCATTTGATAACGTCACATATGTGCCTACCAGTACTACCTATTTCAATGGTAATGGGGTCACTGGATATCATTCTCCACATGGATATGAGTATGTTTCAAATTTCTCATATCAGTGGAGCTCTGCTGGACATGTCAATGGAAATGGTTCAACTACCCTATCTTCTGATCCTGGTTGTAAGGCAAATGGAAATAGGAAGAGAGGAAGACCAAGAATCAAACCAACTGTTGATCAGAGGCATCAATTGGCAGAGACTGTGCCCAATGTAAATTCAGATGTATCATTCTACTGTAATGGACCTCAGGAAATTCCTCCCGCTGGACCCGAGAAGAAAAGGAAAATTGTTGTGGCAGCCAGTTTCCGCAATGGCTGTGAACAAAAGGAATTGAAATATGCTTCTGAATCAAGATTGGCTGATGGAAATGAAAGCGTTGTACATGACCAGAAACTTTCCCGTGCAAGTGAAGTTCAAACAAAGCAGTGTTCCATGGCACCAGCATTTGATGCAAGAAAATTACTGATTGAGAAGGCCAAGACAGATATTCGAAAGAAGCTGGAAGAGATGAAATTGGCATCTGAAGCTGCTGCTGTTGGGGAGAAAGCAAAATCTCAAGCAGAAGTTGGTCAAGTCAATGGAGAGGAGTATAGAAGAGCAGGTCTAAGTGTTTCTGACCATCAATTAGAGAATAGTAAGACTGCTTCTGTCACAATAACTGTCCCTGATTCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGCAGTGCTTCAAGCCAAAGCAAATATGGGCTTTATATGACGAGGAAGATGGCATGCCTCGTTTATATTGTCTAATCCGTGAGGTCATCTCTGTCAATCCATTCAAGATTCTTATTAGTTATTTGAACTCAAAAACTGATAGTGAGTTTGGCCCAGTAAACTGGATAGATTCTGGCTTTACCAAATCTTGTGGAAATTTCAGGGCATACAATTCTGATGTTGTTGACCAGGTAAATATTTTCTCTCATGTTCTGACACGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGCATATATCCCAGAAGTGGAGATATTTGGGCTGTTTATCAAAATTGGTCTCCAGACTGGAACAGATTGACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTTCTTGATGATTACTCTGAACAGCTTGGTGTCTGTGTTAGTCCCCTCATAAAGCTTGCTGGATTTAAAACAGTATATCAAACGAATACAGACAAAAAAGCTGTTAGATGGATACCAAGAAGAGAAATGTTACGCTTTTCACACCAGGTGCCATCTTGGTTGCTAAAGGGAGAGATGAGCAATTTGCCAGGAAGGTTTTGGGACCTTGATCCAGCAGCAACTCCTGATGAACTTCTTCATGCTGCTACAATCATGAATGCTTCATAG 2112 0.4176 MEASKEEALKAIEIAEKRFAQRDFAGAKNYALKAKTICPELEGIPQMVATFQVYVASEAKYNGELDYYSILGIKPSADIETVKKQYRKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMRSSYDFKRNAKLAAGVNQANLSSVHSAGATGYNKCFNLSTSHGGLDSFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAVETGAAPANGSFPYTPWSYVPGNGYGGHSFDNVTYVPTSTTYFNGNGVTGYHSPHGYEYVSNFSYQWSSAGHVNGNGSTTLSSDPGCKANGNRKRGRPRIKPTVDQRHQLAETVPNVNSDVSFYCNGPQEIPPAGPEKKRKIVVAASFRNGCEQKELKYASESRLADGNESVVHDQKLSRASEVQTKQCSMAPAFDARKLLIEKAKTDIRKKLEEMKLASEAAAVGEKAKSQAEVGQVNGEEYRRAGLSVSDHQLENSKTASVTITVPDSDFHDFDKDRSEQCFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKILISYLNSKTDSEFGPVNWIDSGFTKSCGNFRAYNSDVVDQVNIFSHVLTREKAGRGGCIRIYPRSGDIWAVYQNWSPDWNRLTPDEVRHQYEMVEVLDDYSEQLGVCVSPLIKLAGFKTVYQTNTDKKAVRWIPRREMLRFSHQVPSWLLKGEMSNLPGRFWDLDPAATPDELLHAATIMNAS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3702 703 SMART dnaj_3 65 122 IPR001623 -
Prci2g3702 703 Gene3D DnaJ domain 54 150 IPR036869 -
Prci2g3702 703 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Prci2g3702 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Prci2g3702 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Prci2g3702 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
Prci2g3702 703 Pfam DnaJ domain 66 127 IPR001623 -
Prci2g3702 703 MobiDBLite consensus disorder prediction 280 300 - -
Prci2g3702 703 Coils Coil 405 425 - -
Prci2g3702 703 PANTHER BNAC03G44070D PROTEIN 1 690 - -
Prci2g3702 703 CDD DnaJ 66 119 IPR001623 -
Prci2g3702 703 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
Prci2g3702 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3702 Prci-Chr2 46440804 46444741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3702 4 306 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.268 2.51e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3702 - - gmx:100788692 1125.92