Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3690 ATGAAACCATCAAATAACTTATGGATTCGGCGCCAACAATGTCCATGTGGAGATTGGAAGTGTTTTATTAAGTATGATGGAGATGATCAGATATCAGTAAGATCTTCGGCCACAAAGACTGATACAATGCCTTCATCATCATCAGAAGCTGTCTTCACTCCTTATGTAGGTCAAATATTCAAAAGCGATGATGATGCATTTGAATACTATAGCAATTTTGCCCGGAAGAATGGATTTTCAATTAGAAAAGCTCGCTCAACAGAAAGCCAACATTTAGGAATATACAGAAGAGATTTTGTTTGTTACAGATCTGGGTTCAATCAACCAAGAAAAAAGGCCAATGTGGAGCATCACAGAGAGCGAAAATCTGTACGATGTGGATGTGATGCAAAATTATACTTGACTAAGGAAATTGTTGATGGCATTGCTCAATGGTATGTGTCGCAATTTAGTAATGTTCATAACCATGAATTGTTGGAAGATGACCAAGTACGACTTCTACCAGCATATCGTAAGATACAAGAGGCTGATCAGGAACGCATTCTTCTACTGTCCAAAGCTGGATTTCCCGTAAACCGTATTGTGAAGGTGTTAGAGCTTGAAAAGGGAGTTCTGCCTGGACAGCTGCCTTTCATAGAAAAGGATGTTAGGAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAATGATGCTTTACTTACTGAAAAAAGAGAGAATGATATGCATGAACTTGTGGAGACCTGTAAGGCAATGATAGACAAGGATCCCAATTTTGTTTTTGATTATCTTGCTGATGAAAATGGTAAAATTGAAAACATAGCTTGGTCGTATGGTGAATCTATTCGGGCATATTCTGTTTTTGGTGACGTTGTTACTTTGGACACCACATACCGTTCTGTTACTTATGGATTACTTCTTGGTGTGTGGTTTGGCATCGACAATAATGGAAATGCAGTCATATTTGGGTGTGTGTTGTTGCAAGATGAAAGTTCTTATTCATTTGCATGGGCTTTACAGACATTTGTAGGATTTATGAGAGGGAGACATCCACAGACAATTTTAACGGACATAGATCCAACTCTGGGAGATGCCATTTCCAAGGAGTTGTCTGAAACTAAACATGTTATATGCACTTGGCATATTCTATCAAAAATATCAAATTGGTTCTCTGTACCCCTGGGACTACAGTATGCAGATTTGAGGTTAGAGTTTAATATATTATGTCACCTGGAGGGCATAGAAAATTTTGAGCAGCAGTGGGATCTTTTTGTAGCTCGATTTGGACTTGTTTCTGACAAGCATATAGCTTTGCTATTCTCACTTCGAGCATCCTGGCCACTTTGTTACGTAAAGAGTTACTTTATTGCTCGTTCATTAACAGCTGAGTTTTCTCAATCTTTGGACTTAATCTTAAAAAGAATTTTGGATTCCCAAGCATGTCTGCAAGGATTCTTTGAACAGGTAGGTAATGTCGCCACCTCATCAATGTTGGCAAGAGAAGGGATTCACTACATGTGTATAAAGACATGCATGCCTATTGAAGAACATGCAAGGAGCATTCTTACACCTTATGCTTTCAATGTGTTCCAAAATGAAGCTGTGCTTTCAATGCAGTATGCAATGACAGAACTGACCAGTGGATCCTACCTTGTTCAGCACTACAAGAAAATGGATGAAGAGCGCCTTGTAATTTGGGTGCCAGCTGACGAACAAATTCAATGTTCCTGTAAGGAATTTGAACATTCGGGAATATTGTGCCGGCATTCGATTCGTGTACTTACAATGAAGAACTACTTCCAACTACCCATGAAATATTTTCTCCCTCGGTGGCGACGAGAAAGTTCGATGGCTCCTTTTGATGACCAAAATTCTCAGAGCAGTGATGGGTGTGCTCAGGCTTTTCATTCTTTGGCAGCCACCCTGCTGACAGAAACATTAATCTCCAAGGAACGGTTTAATTATGTTCATAGAGAACTCACTGGGATTCTCGAGCGTGTTAAGAATATGGAAGCTGTGGATGAATTTGCTATCAATGCGGCAGCTAATAATGTCAGTGAATCCTAG 2067 0.3953 MKPSNNLWIRRQQCPCGDWKCFIKYDGDDQISVRSSATKTDTMPSSSSEAVFTPYVGQIFKSDDDAFEYYSNFARKNGFSIRKARSTESQHLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGIAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVLPGQLPFIEKDVRNFVRTCKKAVQENDALLTEKRENDMHELVETCKAMIDKDPNFVFDYLADENGKIENIAWSYGESIRAYSVFGDVVTLDTTYRSVTYGLLLGVWFGIDNNGNAVIFGCVLLQDESSYSFAWALQTFVGFMRGRHPQTILTDIDPTLGDAISKELSETKHVICTWHILSKISNWFSVPLGLQYADLRLEFNILCHLEGIENFEQQWDLFVARFGLVSDKHIALLFSLRASWPLCYVKSYFIARSLTAEFSQSLDLILKRILDSQACLQGFFEQVGNVATSSMLAREGIHYMCIKTCMPIEEHARSILTPYAFNVFQNEAVLSMQYAMTELTSGSYLVQHYKKMDEERLVIWVPADEQIQCSCKEFEHSGILCRHSIRVLTMKNYFQLPMKYFLPRWRRESSMAPFDDQNSQSSDGCAQAFHSLAATLLTETLISKERFNYVHRELTGILERVKNMEAVDEFAINAAANNVSES 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3690 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 668 IPR031052 GO:0006355
Prci2g3690 688 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Prci2g3690 688 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Prci2g3690 688 Pfam SWIM zinc finger 570 598 IPR007527 GO:0008270
Prci2g3690 688 SMART 26again6 573 600 IPR006564 GO:0008270
Prci2g3690 688 Pfam MULE transposase domain 291 384 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3690 Prci-Chr2 46339120 46343401 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci2g3690 MULE 5.4e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3690 - - qsa:O6P43_014468 1150.58