Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3681 ATGGCGGATTCGGATAACGAGTCGGGTGGGGCGAACGGAGGCAACGCGAACAGCGATGTGTCGACAAAGGAGCAGGACAGGTTCTTGCCGATAGCGAACGTGAGCAGAATAATGAAGAAGGCGTTGCCGGCGAATGCGAAGATCTCAAAGGACGCGAAGGAGACGGTGCAGGAGTGTGTGTCGGAGTTCATAAGCTTCGTGACGGGGGAGGCGTCGGACAAGTGCCAGAGAGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTGTGGGCCATGACCACTTTAGGGTTCGAAGACTATGTGGAGCCCTTGAAGATTTACCTACAGAAGTATCGGGAGATGGAAGGGGAGAAGATTTCCGTGGGGAAACACGGCGAGAAGGATGGCGGCTCCGGCGGAAGTGGGGTTGTTGGGTTTAATGGTGCTGAGGGTATGTACGGTGGGATGACGGTGGGGCATCATCAGGGACAGGTATACGGTTCTGGTGGGTTCAACCAAGGAGGCGGCGGTGGAGGCTCCAACATGAGATCCAGGGACTTGTTCAGATTTGATTAG 555 0.5532 MADSDNESGGANGGNANSDVSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKYREMEGEKISVGKHGEKDGGSGGSGVVGFNGAEGMYGGMTVGHHQGQVYGSGGFNQGGGGGGSNMRSRDLFRFD 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3681 184 FunFam Nuclear transcription factor Y subunit B-3 17 136 - -
Prci2g3681 184 Gene3D Histone, subunit A 16 135 IPR009072 GO:0046982
Prci2g3681 184 SUPERFAMILY Histone-fold 25 131 IPR009072 GO:0046982
Prci2g3681 184 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Prci2g3681 184 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Prci2g3681 184 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Prci2g3681 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Prci2g3681 184 MobiDBLite consensus disorder prediction 1 25 - -
Prci2g3681 184 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 120 IPR027113 GO:0001228|GO:0006355|GO:0016602
Prci2g3681 184 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Prci2g3681 184 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3681 Prci-Chr2 46315037 46317217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3681 1 154 CCAAT-HAP3 Transcription Factor Family AT4G14540 77.358 1.57e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Prci2g3681 CBFD_NFYB_HMF 1.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3681 K08065 - qsa:O6P43_020714 221.09