Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3635 ATGGGCCTCTCAAGTCTGCCAGCTCCATCTGAAGGAGTACTGTGTGTGCTTCTGGTGAACACTGCATTTTCCATATCCTTAGTTAAAGGCATTGTTAGAACAATCCTTCACATTGTTGGTATCAGTCTTTCGTCATCCCCCACCACTCCACCATCACAATCATCATCAGAATCATCCCCTTCTCCAGATATCTCTCAAGACCTGCCAGAGTCATTCCAATCCAACCTCTGTTCGCCGGAGAATTACATCGACGAGTTCACAAGGCGGACACCAACAATCAAGTTTGGCAGTGTGTGTGGCTGCAAACAACCGGAAGAACATGACTGCTCTGTATGTCTGACTGAGTTTGAACCAGAGTCTGAGATAAACCGGTTGTCTTGCGGCCATCTCTTCCACAAAGATTGCTTGGAGAAGTGGTTGGCGTACTGGAACATTACATGCCCTCTTTGTAGGACTCCATTGTTGCCTGAAGAAGAGGTTTCTTCTTGCTTTTGGTGA 498 0.4679 MGLSSLPAPSEGVLCVLLVNTAFSISLVKGIVRTILHIVGISLSSSPTTPPSQSSSESSPSPDISQDLPESFQSNLCSPENYIDEFTRRTPTIKFGSVCGCKQPEEHDCSVCLTEFEPESEINRLSCGHLFHKDCLEKWLAYWNITCPLCRTPLLPEEEVSSCFW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3635 165 PANTHER - 1 163 IPR044249 -
Prci2g3635 165 MobiDBLite consensus disorder prediction 44 73 - -
Prci2g3635 165 SMART ring_2 109 150 IPR001841 -
Prci2g3635 165 Pfam Ring finger domain 108 151 IPR001841 -
Prci2g3635 165 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Prci2g3635 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 156 IPR013083 -
Prci2g3635 165 SUPERFAMILY RING/U-box 101 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3635 Prci-Chr2 46066920 46068775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3635 1 165 C3H Transcription Factor Family AT2G04240 59.524 2.02e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3635 K16285 - qsa:O6P43_014446 231.106