Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3634 ATGGGTTATATATGTGACTTTTGCGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGTTTATGTTTGTCATGTGATCGGAATGTTCATTCTGCTAATGCTCTTTCAAAGCGTCATTCAAGAAACCTTTTATGTGAGAGATGTAATTCACAACCTGCTCTTGTAAGGTGTTCTGAAGAGAGGATCACACTATGTCAGAACTGTGATTGGTTAGGTCATGGTCCCACTACATCTTCTTCAACACATAAAAGGCAAACAGTCAATTGCTACTCTGGCTGTCCTTCAGCAGAAGAATTTTCTTCAATATGGTCATTTGTCTTGGATATCCCGTCTATGCGTGAAACTACCTGCGAGCAGGAACTAGGTTTGATGACCATTAATGAGAACAGCAACAAAAGTGCTCGCGTTCCTCCAGAAAGCCAGAATGCATCTGGTTCAGCTCAAGCAACTGATTTGCACACCTTTGATAAGTCTTGGGTTGGGGCCTCTGCAATGCCTGAGTCAAGCTCAGAACCTCATATTCTTGATCCATCAAATGGACCTACCAATGAATGTTTGCCCAAGTTAAGCTGTCCAAGTACGAAAGGTCCTGTGCCATATGAAAATGAAGATGATGACCTGTATGGTGATTTTGACATGGATGAAGTGGATCTGGATCTTGAAAACTATGAGGAACTTTTTGGTGTGACACTCACTCATTCTGAAGAACTCTTTGAAAATGGTGGAATTGATAGCTTGTTTGGGACAAAGGGTGTGTCTGCTGCTGAGGGTTCATTGGTTGGACCGGTCAATGCTGTGCAACCAGCATACAGCAATGCAGCATCTGCAGATTCTATTGTGAGCACTAAAACCGAGCCGATTATTTGTTTTGCGGGGAGGCAAGCACAATCAAATCTTTCTTTTTCTGGGGTCACGGGAGAGAGCAGTGCCGGAGATTATCAAGACTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGTCCTGAGAATTCAATACAATCTGCCAACCGTAGCAATGCTGTCATGCGTTATAAGGAAAAGAAGAAGACACGCAAGTTTGACAAAAAAGTGAGGTACGCCTCTCGCAAGGCAAGAGCCGATGTCCGAAGGCGCGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCTTATGATTATGACCCTTTGAGCCCAACCAGAAGCTACTGA 1212 0.448 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRNLLCERCNSQPALVRCSEERITLCQNCDWLGHGPTTSSSTHKRQTVNCYSGCPSAEEFSSIWSFVLDIPSMRETTCEQELGLMTINENSNKSARVPPESQNASGSAQATDLHTFDKSWVGASAMPESSSEPHILDPSNGPTNECLPKLSCPSTKGPVPYENEDDDLYGDFDMDEVDLDLENYEELFGVTLTHSEELFENGGIDSLFGTKGVSAAEGSLVGPVNAVQPAYSNAASADSIVSTKTEPIICFAGRQAQSNLSFSGVTGESSAGDYQDCDASSMLLMGEPPWCPPCPENSIQSANRSNAVMRYKEKKKTRKFDKKVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSPTRSY 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3634 403 ProSiteProfiles CCT domain profile. 346 388 IPR010402 GO:0005515
Prci2g3634 403 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci2g3634 403 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 391 - -
Prci2g3634 403 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Prci2g3634 403 CDD Bbox1_BBX-like 4 44 - -
Prci2g3634 403 Pfam CCT motif 346 388 IPR010402 GO:0005515
Prci2g3634 403 MobiDBLite consensus disorder prediction 133 153 - -
Prci2g3634 403 SMART bboxneu5 48 90 IPR000315 GO:0008270
Prci2g3634 403 SMART bboxneu5 4 47 IPR000315 GO:0008270
Prci2g3634 403 CDD Bbox1_BBX-like 47 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3634 Prci-Chr2 46051351 46057468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3634 1 403 C2C2-CO-like Transcription Factor Family AT3G07650 58.413 1.90e-160 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Prci2g3634 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3634 - - gmx:100796748 648.662