Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3631 ATGACAACAACACCACAAGCGATAACATGCAAAGGTGCCGTGTGGTGGGGCGGCGGAGAAAACGATGTGGCGGTGGAAGACATACAAGTGGATCCTCCGAAGCCAACCGAAGTTCGGGTCAAGATGCTCCGTGCCAGTGTCTGCCACACCGACATCCTAAGGGCCAGAGGACATCCAGTCCCTCTGTTTCCCCGAGTATTAGGGCATGAAGGAGTAGGTGTTGTTGAGAGCATTGGGGGGAAAGTAACAGATCTAGAAGTAGGCGATGTTGTGATTCCCACATGTATTGGTGAATGTCAAGAATGTGAGAACTGCATTTCAAGGGAATCAAATCTATGCCTGAAATATCCTTTGACGTTAAGTGGCTTGATGCTGGATAACACGTCTAGAATGTCCATAAGAGGTCAAAAGATATACCAACTTTTTAGTTGCTCCACATTTGCAGAGTACATGGTTACTGAAGCAAATTACCTTGTCAAAGTTGATCCCAACATTGACCTGGCTCATGCTAGCTTCATCTCTTGTGGGTTCTCAACTGGTTTTGGGGCTGTTTGGAAGGAAGCCAAGGTTGAAAGTGGATCATCTGTGGCTGTATTTGGTCTTGGAGGTGTTGGATTAGGGGCTATAAGTGCAGCCAGAATGATGGGGTCAACTAAGATAATTGGGATTGACAAAAATGAGATGAAGAGAGCAAAAGGAGAAGCTTTTGGAATGACAGATTTTGTGGATCCTGGTGCTTCTGATAAGCCAGTTTCAGAGTTGGTCAAGGAATTAAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTGCTTTCTCAGGCCTTTCAAGCCACAAAATTGACTATCTCATTCTTTGATCATCGTCAGTCTTCAAAGCATGCTCTCCTGCAGTAA 912 0.4561 MTTTPQAITCKGAVWWGGGENDVAVEDIQVDPPKPTEVRVKMLRASVCHTDILRARGHPVPLFPRVLGHEGVGVVESIGGKVTDLEVGDVVIPTCIGECQECENCISRESNLCLKYPLTLSGLMLDNTSRMSIRGQKIYQLFSCSTFAEYMVTEANYLVKVDPNIDLAHASFISCGFSTGFGAVWKEAKVESGSSVAVFGLGGVGLGAISAARMMGSTKIIGIDKNEMKRAKGEAFGMTDFVDPGASDKPVSELVKELSGGMGVDYSFECTGVAPLLSQAFQATKLTISFFDHRQSSKHALLQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3631 303 Pfam Zinc-binding dehydrogenase 203 285 IPR013149 -
Prci2g3631 303 SMART PKS_ER_names_mod 19 302 IPR020843 GO:0016491
Prci2g3631 303 Gene3D - 180 285 - -
Prci2g3631 303 SUPERFAMILY GroES-like 3 191 IPR011032 -
Prci2g3631 303 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 290 - -
Prci2g3631 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 286 IPR036291 -
Prci2g3631 303 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Prci2g3631 303 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Prci2g3631 303 PANTHER ALCOHOL DEHYDROGENASE 6 285 - -
Prci2g3631 303 Gene3D - 14 179 - -
Prci2g3631 303 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3631 Prci-Chr2 46008135 46012163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3631 37 230 Monolignol Biosynthesis Gene Families AT4G37980 30.102 4.85e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3631 K00121 - gmx:100798341 402.905