Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3630 ATGACAACAACACCACAAGCGATAACATGCAAAGGTGCCGTGTGGTGGGGCGGCGGAGAAAACGATGTGGCGGTGGAAGACATACAAGTGGATCCTCCGAAGCCAACCGAAGTTCGGGTCAAGATGCTCCGTGCCAGTGTCTGCCACACCGACATCCTAAGGGCCAGAGGACATCCAGTCCCTCTGTTTCCCCGAGTATTAGGGCATGAAGGAGTAGGTGTTGTTGAGAGCATTGGGGGGAAAGTAACAGATCTAGAAGTAGGCGATGTTGTGATTCCCACATGTATTGGTGAATGTCAAGAATGTGAGAACTGCATTTCAAGGGAATCAAATCTATGCCTGAAATATCCTTTGACGTTAAGTGGCTTGATGCTGGATAACACGTCTAGAATGTCCATAAGAGGTCAAAAGATATACCAACTTTTTAGTTGCTCCACATTTGCAGAGTACATGGTTACTGAAGCAAATTACCTTGTCAAAGTTGATCCCAACATTGACCTGGCTCATGCTAGCTTCATCTCTTGTGGGTTCTCAACTGGTTTTGGGGCTGTTTGGAAGGAAGCCAAGGTTGAAAGTGGATCATCTGTGGCTGTATTTGGTCTTGGAGGTGTTGGATTAGGGGCTATAAGTGCAGCCAGAATGATGGGGTCAACTAAGATAATTGGGATTGACAAAAATGAGATGAAGAGAGCAAAAGGAGAAGCTTTTGGAATGACAGATTTTGTGGATCCTGGTGCTTCTGATAAGCCAGTTTCAGAGTTGGTCAAGGAATTAAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTGCTTTCTCAGGCCTTTCAAGCCACAAAATTGGGAAAAGGAAAGACAATAGCAGTAGGTGCAGTAACTGAACAATTTGTGCACATCGACTTTGTCTCTCTCATTCTTGGGAGAACTTTAAAAGGTTCAATATTTGGAGGATTAAAACCCAAATCTCACCTCCCTTTCTTAGCTGACAAATGCTTGAAAAAGGCGTTTCCTCTTGACCAACTTCTTACCCACGAGGTGTCACTGGTAGATATAAGCAAAGCTTTGGAGCTGCTAAAACAACCAGACTGTGTTAAAGTTGTTATTAGGATATGA 1128 0.4441 MTTTPQAITCKGAVWWGGGENDVAVEDIQVDPPKPTEVRVKMLRASVCHTDILRARGHPVPLFPRVLGHEGVGVVESIGGKVTDLEVGDVVIPTCIGECQECENCISRESNLCLKYPLTLSGLMLDNTSRMSIRGQKIYQLFSCSTFAEYMVTEANYLVKVDPNIDLAHASFISCGFSTGFGAVWKEAKVESGSSVAVFGLGGVGLGAISAARMMGSTKIIGIDKNEMKRAKGEAFGMTDFVDPGASDKPVSELVKELSGGMGVDYSFECTGVAPLLSQAFQATKLGKGKTIAVGAVTEQFVHIDFVSLILGRTLKGSIFGGLKPKSHLPFLADKCLKKAFPLDQLLTHEVSLVDISKALELLKQPDCVKVVIRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3630 375 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
Prci2g3630 375 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Prci2g3630 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 336 IPR036291 -
Prci2g3630 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Prci2g3630 375 Gene3D - 180 318 - -
Prci2g3630 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Prci2g3630 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Prci2g3630 375 CDD liver_alcohol_DH_like 8 374 - -
Prci2g3630 375 Gene3D - 14 370 - -
Prci2g3630 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Prci2g3630 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Prci2g3630 375 SUPERFAMILY GroES-like 3 191 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3630 Prci-Chr2 46007710 46012161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3630 37 315 Monolignol Biosynthesis Gene Families AT4G37980 28.114 1.10e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3630 K00121 - qsa:O6P43_001731 515.768