Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3602 ATGCCTCATGAGAGTCTAGGTCATGACAACATTTGTACAGATGTTTTTGATGGAAAGATTTGCATCCGTTGCAATGAAGGTGGAGAAGTATTAATTTGCAGTGAAAGTGGTTGTCCTGTTACTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGGTATAGGGAACTACTACTGCCCTTATTGCTGGTTAAAACGAACTTTGGCAGAGGTCCAAGTATTGAGGAAAAAGGCCTTAACAGCGAAGAAAGATTTGTCTGACTTTTTAGGTAACAGTGGGAGCATGAGTAGTAAGTTGGCCCAAAATTACGGGGAAGCAGGAAAAGATTCCAACGAGTTATCCCTTGGGGGAAATGGGAGCCGCATGGATTACAAGAGTGGGCAGGAAAATGGCAGTGCATGCGCATGGTCCTTGCAGAGAGTGGAAGATCAACAAAAAGAAACGGAAGGAGTGACATCTAGTGCTGATCAACATGAAATAGCAGTTGAAGATGAAACTCATGCAAATGCTGAAGTGGCCAATACTGGTTCTATGCATCATGTGGAAGAAAAGACACCAGAGCATATGGATCTGATTGATAAATCCATGACCAGGGAGAAAGTTGATCATAAAATTTCAGAGGCACATAAAACCACTTTTGTTGAAGGAAAAGAGGGGATTGAACCAGAGCATCCAAAATATAGTGATAAAAGCCTTGACGAAGGGATCCCTGAGGATGAAGAGGAAGTATCCCCTTCGAGCTCATACCATTTGGGAAAACACAAAGATGGACCCTCACCTGATATTGCAATTGTCAAAGGGACACAAGAAAGTGGTGCTGTGACTGTAGATAAAAAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAGGACGCCTTCAATGGGTACTTCTGTCAGTGAAACTGATGATTCAGGTTCTGAAGCTCTCTTAATGAAGAAAAGACGTGTCAAACATATGGCAAAGAGGCATCCTCAGAGAGTTATGAATGCTGAGGGTGAAACTGGTTGTCACAAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACGGGTCCAGAAATCTTCTAAGCAAGGCAAAAAACTGACTTTACCAGCTAGAAAGCGGAAGAGATTACGCTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTCAAGATTCTCAAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTGATGTATTTGATACTACACGCACCCCAATTGATCTTAAGGATAAATGGAGGACCATGACAGTGGGGCCAGGACACAGTCGACCTTGGGAGATTTCTGCAGACTAA 1338 0.423 MPHESLGHDNICTDVFDGKICIRCNEGGEVLICSESGCPVTVHAKCISCKPKFDGIGNYYCPYCWLKRTLAEVQVLRKKALTAKKDLSDFLGNSGSMSSKLAQNYGEAGKDSNELSLGGNGSRMDYKSGQENGSACAWSLQRVEDQQKETEGVTSSADQHEIAVEDETHANAEVANTGSMHHVEEKTPEHMDLIDKSMTREKVDHKISEAHKTTFVEGKEGIEPEHPKYSDKSLDEGIPEDEEEVSPSSSYHLGKHKDGPSPDIAIVKGTQESGAVTVDKKDTRQDREKLLQNESRTPSMGTSVSETDDSGSEALLMKKRRVKHMAKRHPQRVMNAEGETGCHKDEEVTSSGTLRRVQKSSKQGKKLTLPARKRKRLRWTTEEENKLKEGVSRFSKENRNIPWRKILEFGCDVFDTTRTPIDLKDKWRTMTVGPGHSRPWEISAD 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3602 445 MobiDBLite consensus disorder prediction 294 310 - -
Prci2g3602 445 MobiDBLite consensus disorder prediction 214 235 - -
Prci2g3602 445 SUPERFAMILY Homeodomain-like 378 441 IPR009057 -
Prci2g3602 445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 96 IPR013083 -
Prci2g3602 445 ProSiteProfiles Myb-like domain profile. 371 431 IPR001005 -
Prci2g3602 445 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 14 432 - -
Prci2g3602 445 MobiDBLite consensus disorder prediction 103 130 - -
Prci2g3602 445 MobiDBLite consensus disorder prediction 330 352 - -
Prci2g3602 445 Pfam Myb-like DNA-binding domain 377 430 IPR001005 -
Prci2g3602 445 ProSitePatterns Zinc finger PHD-type signature. 21 64 IPR019786 -
Prci2g3602 445 MobiDBLite consensus disorder prediction 275 293 - -
Prci2g3602 445 MobiDBLite consensus disorder prediction 214 374 - -
Prci2g3602 445 CDD SANT_TRF 378 431 - -
Prci2g3602 445 MobiDBLite consensus disorder prediction 359 374 - -
Prci2g3602 445 SMART PHD_3 20 65 IPR001965 -
Prci2g3602 445 MobiDBLite consensus disorder prediction 245 262 - -
Prci2g3602 445 SMART sant 375 433 IPR001005 -
Prci2g3602 445 SUPERFAMILY FYVE/PHD zinc finger 18 72 IPR011011 -
Prci2g3602 445 Gene3D - 379 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3602 Prci-Chr2 45887726 45892159 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g3602 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3602 - - pcin:129302004 908.286