Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3601 ATGAGAACGAAATCTCATGATGGAGGCAGGGCTAAAACTTCTACAAAACCCTCCCATCCTACTGTGAGGGCAATTCCTCGAGTGAGTCAGGATGCAGATGGTGCAGCTGTGCCTAAAATATCCAATGAGAGTAATCGTGATCTGCTAGATGTTAGAGAGGTGGATTCAAAAGACAATTTGGATAATGTAATTCATGAGGGCTCTAATAGAATGCCTCATGAGAGTCTAGGTCATGACAACATTTGTACAGATGTTTTTGATGGAAAGATTTGCATCCGTTGCAATGAAGGTGGAGAAGTATTAATTTGCAGTGAAAGTGGTTGTCCTGTTACTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGGTATAGGGAACTACTACTGCCCTTATTGCTGGTTAAAACGAACTTTGGCAGAGGTCCAAGTATTGAGGAAAAAGGCCTTAACAGCGAAGAAAGATTTGTCTGACTTTTTAGGTAACAGTGGGAGCATGAGTAGTAAGTTGGCCCAAAATTACGGGGAAGCAGGAAAAGATTCCAACGAGTTATCCCTTGGGGGAAATGGGAGCCGCATGGATTACAAGAGTGGGCAGGAAAATGGCAGTGCATGCGCATGGTCCTTGCAGAGAGTGGAAGATCAACAAAAAGAAACGGAAGGAGTGACATCTAGTGCTGATCAACATGAAATAGCAGTTGAAGATGAAACTCATGCAAATGCTGAAGTGGCCAATACTGGTTCTATGCATCATGTGGAAGAAAAGACACCAGAGCATATGGATCTGATTGATAAATCCATGACCAGGGAGAAAGTTGATCATAAAATTTCAGAGGCACATAAAACCACTTTTGTTGAAGGAAAAGAGGGGATTGAACCAGAGCATCCAAAATATAGTGATAAAAGCCTTGACGAAGGGATCCCTGAGGATGAAGAGGAAGTATCCCCTTCGAGCTCATACCATTTGGGAAAACACAAAGATGGACCCTCACCTGATATTGCAATTGTCAAAGGGACACAAGAAAGTGGTGCTGTGACTGTAGATAAAAAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAGGACGCCTTCAATGGGTACTTCTGTCAGTGAAACTGATGATTCAGGTTCTGAAGCTCTCTTAATGAAGAAAAGACGTGTCAAACATATGGCAAAGAGGCATCCTCAGAGAGTTATGAATGCTGAGGGTGAAACTGGTTGTCACAAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACGGGTCCAGAAATCTTCTAAGCAAGGCAAAAAACTGACTTTACCAGCTAGAAAGCGGAAGAGATTACGCTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTCAAGATTCTCAAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTGATGTATTTGATACTACACGCACCCCAATTGATCTTAAGGATAAATGGAGGACCATGACAGTGGGGCCAGGACACAGTCGACCTTGGGAGATTTCTGCAGACTAA 1548 0.4238 MRTKSHDGGRAKTSTKPSHPTVRAIPRVSQDADGAAVPKISNESNRDLLDVREVDSKDNLDNVIHEGSNRMPHESLGHDNICTDVFDGKICIRCNEGGEVLICSESGCPVTVHAKCISCKPKFDGIGNYYCPYCWLKRTLAEVQVLRKKALTAKKDLSDFLGNSGSMSSKLAQNYGEAGKDSNELSLGGNGSRMDYKSGQENGSACAWSLQRVEDQQKETEGVTSSADQHEIAVEDETHANAEVANTGSMHHVEEKTPEHMDLIDKSMTREKVDHKISEAHKTTFVEGKEGIEPEHPKYSDKSLDEGIPEDEEEVSPSSSYHLGKHKDGPSPDIAIVKGTQESGAVTVDKKDTRQDREKLLQNESRTPSMGTSVSETDDSGSEALLMKKRRVKHMAKRHPQRVMNAEGETGCHKDEEVTSSGTLRRVQKSSKQGKKLTLPARKRKRLRWTTEEENKLKEGVSRFSKENRNIPWRKILEFGCDVFDTTRTPIDLKDKWRTMTVGPGHSRPWEISAD 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3601 515 Gene3D - 449 509 - -
Prci2g3601 515 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 29 502 - -
Prci2g3601 515 SUPERFAMILY Homeodomain-like 448 511 IPR009057 -
Prci2g3601 515 MobiDBLite consensus disorder prediction 400 422 - -
Prci2g3601 515 Pfam Myb-like DNA-binding domain 447 500 IPR001005 -
Prci2g3601 515 ProSiteProfiles Myb-like domain profile. 441 501 IPR001005 -
Prci2g3601 515 MobiDBLite consensus disorder prediction 364 380 - -
Prci2g3601 515 MobiDBLite consensus disorder prediction 284 305 - -
Prci2g3601 515 MobiDBLite consensus disorder prediction 173 200 - -
Prci2g3601 515 SMART sant 445 503 IPR001005 -
Prci2g3601 515 SUPERFAMILY FYVE/PHD zinc finger 88 142 IPR011011 -
Prci2g3601 515 CDD SANT_TRF 448 501 - -
Prci2g3601 515 MobiDBLite consensus disorder prediction 284 436 - -
Prci2g3601 515 ProSitePatterns Zinc finger PHD-type signature. 91 134 IPR019786 -
Prci2g3601 515 MobiDBLite consensus disorder prediction 315 332 - -
Prci2g3601 515 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Prci2g3601 515 SMART PHD_3 90 135 IPR001965 -
Prci2g3601 515 MobiDBLite consensus disorder prediction 345 363 - -
Prci2g3601 515 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3601 Prci-Chr2 45887648 45892159 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g3601 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3601 - - pcin:129302004 1046.57