Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g3598 | ATGGATGCAGATGGTGCAGCTGTGCCTAAAATATCCAATGAGAGTAATCGTGATCTGCTAGATGTTAGAGAGGTGGATTCAAAAGACAATTTGGATAATGTAATTCATGAGGGCTCTAATAGAATGCCTCATGAGAGTCTAGGTCATGACAACATTTGTACAGATGTTTTTGATGGAAAGATTTGCATCCGTTGCAATGAAGGTGGAGAAGTATTAATTTGCAGTGAAAGTGGTTGTCCTGTTACTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGGTATAGGGAACTACTACTGCCCTTATTGCTGGTTAAAACGAACTTTGGCAGAGGTCCAAGTATTGAGGAAAAAGGCCTTAACAGCGAAGAAAGATTTGTCTGACTTTTTAGGTAACAGTGGGAGCATGAGTAGTAAGTTGGCCCAAAATTACGGGGAAGCAGGAAAAGATTCCAACGAGTTATCCCTTGGGGGAAATGGGAGCCGCATGGATTACAAGAGTGGGCAGGAAAATGGCAGTGCATGCGCATGGTCCTTGCAGAGAGTGGAAGATCAACAAAAAGAAACGGAAGGAGTGACATCTAGTGCTGATCAACATGAAATAGCAGTTGAAGATGAAACTCATGCAAATGCTGAAGTGGCCAATACTGGTTCTATGCATCATGTGGAAGAAAAGACACCAGAGCATATGGATCTGATTGATAAATCCATGACCAGGGAGAAAGTTGATCATAAAATTTCAGAGGCACATAAAACCACTTTTGTTGAAGGAAAAGAGGGGATTGAACCAGAGCATCCAAAATATAGTGATAAAAGCCTTGACGAAGGGATCCCTGAGGATGAAGAGGAAGTATCCCCTTCGAGCTCATACCATTTGGGAAAACACAAAGATGGACCCTCACCTGATATTGCAATTGTCAAAGGGACACAAGAAAGTGGTGCTGTGACTGTAGATAAAAAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAGGACGCCTTCAATGGGTACTTCTGTCAGTGAAACTGATGATTCAGGTTCTGAAGCTCTCTTAATGAAGAAAAGACGTGTCAAACATATGGCAAAGAGGCATCCTCAGAGAGTTATGAATGCTGAGGGTGAAACTGGTTGTCACAAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACGGGTCCAGAAATCTTCTAAGCAAGGCAAAAAACTGACTTTACCAGCTAGAAAGCGGAAGAGATTACGCTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTCAAGATTCTCAAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTGATGTATTTGATACTACACGCACCCCAATTGATCTTAAGGATAAATGGAGGACCATGACAGTGGGGCCAGGACACAGTCGACCTTGGGAGATTTCTGCAGACTAA | 1461 | 0.4203 | MDADGAAVPKISNESNRDLLDVREVDSKDNLDNVIHEGSNRMPHESLGHDNICTDVFDGKICIRCNEGGEVLICSESGCPVTVHAKCISCKPKFDGIGNYYCPYCWLKRTLAEVQVLRKKALTAKKDLSDFLGNSGSMSSKLAQNYGEAGKDSNELSLGGNGSRMDYKSGQENGSACAWSLQRVEDQQKETEGVTSSADQHEIAVEDETHANAEVANTGSMHHVEEKTPEHMDLIDKSMTREKVDHKISEAHKTTFVEGKEGIEPEHPKYSDKSLDEGIPEDEEEVSPSSSYHLGKHKDGPSPDIAIVKGTQESGAVTVDKKDTRQDREKLLQNESRTPSMGTSVSETDDSGSEALLMKKRRVKHMAKRHPQRVMNAEGETGCHKDEEVTSSGTLRRVQKSSKQGKKLTLPARKRKRLRWTTEEENKLKEGVSRFSKENRNIPWRKILEFGCDVFDTTRTPIDLKDKWRTMTVGPGHSRPWEISAD | 486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 255 | 407 | - | - | |
Prci2g3598 | 486 | ProSiteProfiles | Myb-like domain profile. | 412 | 472 | IPR001005 | - | |
Prci2g3598 | 486 | SMART | sant | 416 | 474 | IPR001005 | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 335 | 351 | - | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 286 | 303 | - | - | |
Prci2g3598 | 486 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 26 | 473 | - | - | |
Prci2g3598 | 486 | CDD | SANT_TRF | 419 | 472 | - | - | |
Prci2g3598 | 486 | Pfam | Myb-like DNA-binding domain | 418 | 471 | IPR001005 | - | |
Prci2g3598 | 486 | SUPERFAMILY | Homeodomain-like | 419 | 482 | IPR009057 | - | |
Prci2g3598 | 486 | ProSitePatterns | Zinc finger PHD-type signature. | 62 | 105 | IPR019786 | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 316 | 334 | - | - | |
Prci2g3598 | 486 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 137 | IPR013083 | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 255 | 276 | - | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 144 | 171 | - | - | |
Prci2g3598 | 486 | SMART | PHD_3 | 61 | 106 | IPR001965 | - | |
Prci2g3598 | 486 | MobiDBLite | consensus disorder prediction | 371 | 393 | - | - | |
Prci2g3598 | 486 | SUPERFAMILY | FYVE/PHD zinc finger | 59 | 113 | IPR011011 | - | |
Prci2g3598 | 486 | Gene3D | - | 420 | 480 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g3598 | Prci-Chr2 | 45880072 | 45892159 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Prci2g3598 | Myb_DNA-binding | 1.3e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g3598 | - | - | pcin:129302004 | 986.482 |