Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3598 ATGGATGCAGATGGTGCAGCTGTGCCTAAAATATCCAATGAGAGTAATCGTGATCTGCTAGATGTTAGAGAGGTGGATTCAAAAGACAATTTGGATAATGTAATTCATGAGGGCTCTAATAGAATGCCTCATGAGAGTCTAGGTCATGACAACATTTGTACAGATGTTTTTGATGGAAAGATTTGCATCCGTTGCAATGAAGGTGGAGAAGTATTAATTTGCAGTGAAAGTGGTTGTCCTGTTACTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGGTATAGGGAACTACTACTGCCCTTATTGCTGGTTAAAACGAACTTTGGCAGAGGTCCAAGTATTGAGGAAAAAGGCCTTAACAGCGAAGAAAGATTTGTCTGACTTTTTAGGTAACAGTGGGAGCATGAGTAGTAAGTTGGCCCAAAATTACGGGGAAGCAGGAAAAGATTCCAACGAGTTATCCCTTGGGGGAAATGGGAGCCGCATGGATTACAAGAGTGGGCAGGAAAATGGCAGTGCATGCGCATGGTCCTTGCAGAGAGTGGAAGATCAACAAAAAGAAACGGAAGGAGTGACATCTAGTGCTGATCAACATGAAATAGCAGTTGAAGATGAAACTCATGCAAATGCTGAAGTGGCCAATACTGGTTCTATGCATCATGTGGAAGAAAAGACACCAGAGCATATGGATCTGATTGATAAATCCATGACCAGGGAGAAAGTTGATCATAAAATTTCAGAGGCACATAAAACCACTTTTGTTGAAGGAAAAGAGGGGATTGAACCAGAGCATCCAAAATATAGTGATAAAAGCCTTGACGAAGGGATCCCTGAGGATGAAGAGGAAGTATCCCCTTCGAGCTCATACCATTTGGGAAAACACAAAGATGGACCCTCACCTGATATTGCAATTGTCAAAGGGACACAAGAAAGTGGTGCTGTGACTGTAGATAAAAAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAGGACGCCTTCAATGGGTACTTCTGTCAGTGAAACTGATGATTCAGGTTCTGAAGCTCTCTTAATGAAGAAAAGACGTGTCAAACATATGGCAAAGAGGCATCCTCAGAGAGTTATGAATGCTGAGGGTGAAACTGGTTGTCACAAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACGGGTCCAGAAATCTTCTAAGCAAGGCAAAAAACTGACTTTACCAGCTAGAAAGCGGAAGAGATTACGCTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTCAAGATTCTCAAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTGATGTATTTGATACTACACGCACCCCAATTGATCTTAAGGATAAATGGAGGACCATGACAGTGGGGCCAGGACACAGTCGACCTTGGGAGATTTCTGCAGACTAA 1461 0.4203 MDADGAAVPKISNESNRDLLDVREVDSKDNLDNVIHEGSNRMPHESLGHDNICTDVFDGKICIRCNEGGEVLICSESGCPVTVHAKCISCKPKFDGIGNYYCPYCWLKRTLAEVQVLRKKALTAKKDLSDFLGNSGSMSSKLAQNYGEAGKDSNELSLGGNGSRMDYKSGQENGSACAWSLQRVEDQQKETEGVTSSADQHEIAVEDETHANAEVANTGSMHHVEEKTPEHMDLIDKSMTREKVDHKISEAHKTTFVEGKEGIEPEHPKYSDKSLDEGIPEDEEEVSPSSSYHLGKHKDGPSPDIAIVKGTQESGAVTVDKKDTRQDREKLLQNESRTPSMGTSVSETDDSGSEALLMKKRRVKHMAKRHPQRVMNAEGETGCHKDEEVTSSGTLRRVQKSSKQGKKLTLPARKRKRLRWTTEEENKLKEGVSRFSKENRNIPWRKILEFGCDVFDTTRTPIDLKDKWRTMTVGPGHSRPWEISAD 486
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3598 486 MobiDBLite consensus disorder prediction 255 407 - -
Prci2g3598 486 ProSiteProfiles Myb-like domain profile. 412 472 IPR001005 -
Prci2g3598 486 SMART sant 416 474 IPR001005 -
Prci2g3598 486 MobiDBLite consensus disorder prediction 335 351 - -
Prci2g3598 486 MobiDBLite consensus disorder prediction 286 303 - -
Prci2g3598 486 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 26 473 - -
Prci2g3598 486 CDD SANT_TRF 419 472 - -
Prci2g3598 486 Pfam Myb-like DNA-binding domain 418 471 IPR001005 -
Prci2g3598 486 SUPERFAMILY Homeodomain-like 419 482 IPR009057 -
Prci2g3598 486 ProSitePatterns Zinc finger PHD-type signature. 62 105 IPR019786 -
Prci2g3598 486 MobiDBLite consensus disorder prediction 316 334 - -
Prci2g3598 486 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 137 IPR013083 -
Prci2g3598 486 MobiDBLite consensus disorder prediction 255 276 - -
Prci2g3598 486 MobiDBLite consensus disorder prediction 144 171 - -
Prci2g3598 486 SMART PHD_3 61 106 IPR001965 -
Prci2g3598 486 MobiDBLite consensus disorder prediction 371 393 - -
Prci2g3598 486 SUPERFAMILY FYVE/PHD zinc finger 59 113 IPR011011 -
Prci2g3598 486 Gene3D - 420 480 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci2g3598 Prci-Chr2 45880072 45892159 Dispersed/Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g3598 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3598 - - pcin:129302004 986.482