Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3591 ATGGCGACACAGGCTTTGGTGTCTTCATCATCTCTCACCTCGTCGGTGCAGGCTGCGAGGCAGATTCTGGGAGGGAGATCAACCCAGTATCCAAGTGGGTCTTCTAGAAAGACTTCTTTTGTAGTGAAGGCATCTGCTACACCTCCTGTCAAGCAAGGAGCAGATAGACCCTTGTGGTTTGCATCCAAACAGAGTCTTTCTTACTTGGATGGCAGTCTTCCAGGTGACTATGGATTTGACCCACTAGGACTCTCAGACCCAGAGGGACCTGGAGGGTTCATTGAACCCAGATGGCTAGCATATGGTGAAATCATCAACGGACGTTATGCAATGTTGGGTGCAGTAGGAGCCATAGCACCTGAAATCCTAGGCAAGGCTGGTCTAATCCCCCAGGAAACAGCACTTCCATGGTTCAAAACAGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCTGACCCATACACCCTCTTTGTGCTAGAAATGGCACTGATGGGCTTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAGCCCGGGTCAATGGGGAAGCAGTACTTCTTGGGCCTAGAAAAGGGCTTGGGAGGGTCTGGTGACCCGGCTTACCCTGGAGGCCCATTCTTTAACCCTCTTGGGTTTGGGAAGGATGAGAAGTCAATGAAGGATTTGAAGTTGAAGGAAGTGAAGAATGGGAGGTTGGCTATGTTGGCTATCTTGGGATACTTTGTACAAGGTCTTGTGACTGGTGTTGGACCCTACCAGAACCTTCTGGATCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTCAAGTTCCATTAA 831 0.5018 MATQALVSSSSLTSSVQAARQILGGRSTQYPSGSSRKTSFVVKASATPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3591 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Prci2g3591 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Prci2g3591 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Prci2g3591 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 271 IPR001344 GO:0009765|GO:0016020
Prci2g3591 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3591 Prci-Chr2 45834702 45836426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3591 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 87.984 5.60e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3591 K08909 - qsa:O6P43_014419 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g3591 2 45834702 45836426 Prci2g3591 2 45834702 45836426 ECH