Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3584 ATGGCTTCTTCCTCTCCTTCCTCAAAGAAATACGATGTTTTCGTCAGCTTCAGAGGCGAAGACACGCGCGACAATTTCACCAGCCATCTTCATGCCGCTCTTTGCGGAAGCAAAATCGACACCTACGTCGATTACAGACTTGAGAAAGGAAGTGAGGTTTGGCCATCGCTTGTCCAAGCCATTGACGATTCGATCCTATTTCTGGTCATTTTTTCTGAGAACTATGCTTCTTCCACATGGTGCCTGAATGAGATCGCCAAAATTATTCTCGATTACTCTAAGGATCAGGAGCATCGTGTGCTTCCAGTCTTCTATAGGGTGAACCCTTCCCATGTACGGAAACAAACAGGGAGTTATGGAGAAGCATTTATAAAACACGAGCAAGGCAATCACAGTCAGCAAGTGCAAAAATGGAGGAGCGCTCTTACTCAAGCTGCTAATTTATCTGGTTGGGACTTTAGCACCTATAGGAATGAAGCTGAGCTGATTGTAGATATTGTCATATGTGTTTTAAAGAAGTTGGAGCGTATTCACCAAATTGACGCTTTTGTTGGTCTTGTTGGAATTCATGAACGAATTGTACCTGTAGAATTATTACTGAGTAAGGAGTCACAAGATGTTCGATTTATTGGAATTTGGGGCATGGCTGGAATTGGCAAGACAACTATTGCAGATGCTGTATTTAAGAAACATTGCTGTGATTATGAAGGGTTTTGCTTCTTGGCTAATGTAAGAGAAGAGTCAAAGAAGTGGGGAATTGCTTATTTGAAGAGTAAACTTCTTTTCAAGTTATTAGAGGATCAAGAACCTTACATTGGTATGCCTGATAGAGGAACTCCTTTGGATATGAAGAGGCTTAAAAGAAAAAAGGTTTTCGTTGTTCTTGATGATGTTAGTGACTCAGATCAACTAGAAATTTTAGCTGGAGCACGTGATTGGTTTGGACCAGGCAGTAGAATCATTATAACATCCAGAGATAAAAACGTGCTTGGTAAAGAGGTCCGTCATGTGCATGTGGTCAAGGCTTTGAACTTTGGTGAAGCTCTTCAACTTTTCAATTTGAATGCCTTTAAAAACAATGTCATTGACAAAGAGTTCGCCTTATTATCAAGGAAGGTGGTTCTTTATGCAAAAGGGCTCCCCTTAGCTCTGAAAATTTTGGGTTCATTTCTTTATGGAAAAAGCAAAAGTGAGTGGGAAAGTCAACTAGAAAAACTCAAAAGACTGCCTGACATGAAAATTCAAAATGTATTGAAATTAAGTTATGATGGATTAGATTTCCAAGAGAGAAACATTTTTTTAGATATTGCATGCTTTTTCAAGGGCAGAAAGGTAGAGGACATTAAAAATTTGTTAGATGCATGTGATTATGCAACAACTATCGGATTGAGAACTCTTGAGGACAAAGCTCTTCTAACTATTCTTGATGAGAAGGTATCCATGCATGATCTAATACAAGAAATGGCTTGGGAGATAGTTCGAGAAGAATCAATGGAAGAACCTGGAAAACGCAGTCGATTATGGGATTTTAATGATGTCTATGAAGTATTGAAATATAATGTGGGAACTGAGTCCATCAAAGGCATTGCTTTGGATTTGTCAAAAATTGACGACCTGCCCTTAAGTCCTGAAGTCTTCTCCAAAATGCGCAAGCTTAAATTTCTTATATTTTATAATTTTGGTTCCGAAGAGTTCAGAATGTATCTACCTCAAGACCTTAGATGTTTACCAAATGAACTCAGACTTCTTCACTGGGATAACTTTCCTTTGAAGTCCTTACCGCCTACATTCTCCGCTGAGAAACTTGTGTCGTTTGAAATGCGAAATAGCCAAGTCAGGATACTTTGGCATGGAAAGCAAAATCTTGTGAACTTGAGGAAAATAGACCTCACCGATTGCTATAATCTAATTGAGCTCCCAGATTTTTCAAAGGCCTCGAATCTTAAGCAAGTATATCTTAGCAAATGCACAAGCTTGCGTGACCTTCATCCATCTATTTTATCGCTGCATAAACTTGAGATTCTGGCATTGGATTGGTGTGAGGCCCTTACTAGCCTTAGATCTGATACGCCTTTAAGATCCCTTCGTGATCTTTCCCTCTATGACTGCTCAAGATTGAAGGTATTTTCAGTCACCTCACATAATATGAGGCATTTGAATCTAGCGGGGACTGCAGTGAGTGAATTGCCATCATCTATTACAAGTCAAGGAAGACTTGAAACGTTCTCTCTTATTGATGGTAGAAGCCTTGATACTCCAAGCAAGTCAGGTGATCTGATATCTCTTGGCGAGTTACATACCGGAGATAATTACATGCACCTTGATGCATCAAATCTGCGTTTCTTGTACGATGGTTTAAGATCTTTGGAAGCCTTGCCACGTGAGACTAGCATGTTTTCTTCATTAGAAGTCTTGTTAATTGTTGGAACTGAACTTAGAAACTTGCCTGCAAGCATCAAGCACCTTTTGAGGCTTAGATACATTCGCTTTGATTCATGCAAAAGACTTCAGTCTCTGCCGGATCTCCCTTCATCATTAGAACAATTAATAGCCATAGACTGCCCATCACTTGAGACTCTTAACTTCTCTTCGACAACTAGTCAACTATTGAAGGCAAACAAGATAAGCTTTGACTTCCAAAACTGTGCGAAGTTAGATGAACATTCATTCAAACTATTTGGATCGAATGTCATGGCTGAGATAATCAAATCTGTTCCAGCCATAGAGAAATGCAGTTTCTCGAACGGTAAGGTTGAGGTTATATACCCCGGAAGCAGAGTTCCAGAGTGGTTCCTGCATAAGACGACACAAGCTTCCGTTACTATTGATCTCTCTTCTGCTCTGGATTGTTCTGAGAATTGGGGTTTCATCTTCTGCATCATTGTTCCTGAGGCTCCGTCAATTGAATGGATTCGAATTGAATGTGGAGCCTGTTTGGAAATTAGTCGTGGAGAATGGGAAGAGACACACGAGTTCTATTCACTCTCTGCAAAGCATGTCAACTTCTCATCGGATCATGTTTTTCTTTACTATGATGAGAACTTCTGTTCTGAAATACATGAAACACTCAAAGAAAGTGTAGGAGATGTTCAGAACAACGTTCGTAAACCAAAGGTTTCGTTTAATTTCTGGGTTCATTTTGGTGGTGGGGACATTCATGAGAAGCAAGAGGGATGCTTGGATATAATAGGGTGTGGGGTGTGCTCAACATATGCATCAGAATATCGTGATTTCATTGAAAAAATGAACTTGCAATTACAGTCAAAAACTGATGCAATTGAAATGGGACATGGAAGCTCTCATGAGAACGAACAGAAACAGAAATCTGAGGAGGGAGTTGTCTTTCCATATCTTGCACGTGGAACCTGGAAGCATGGAACGAAGGGGTTGAAAGACTTCTTCGCATGA 3408 0.3996 MASSSPSSKKYDVFVSFRGEDTRDNFTSHLHAALCGSKIDTYVDYRLEKGSEVWPSLVQAIDDSILFLVIFSENYASSTWCLNEIAKIILDYSKDQEHRVLPVFYRVNPSHVRKQTGSYGEAFIKHEQGNHSQQVQKWRSALTQAANLSGWDFSTYRNEAELIVDIVICVLKKLERIHQIDAFVGLVGIHERIVPVELLLSKESQDVRFIGIWGMAGIGKTTIADAVFKKHCCDYEGFCFLANVREESKKWGIAYLKSKLLFKLLEDQEPYIGMPDRGTPLDMKRLKRKKVFVVLDDVSDSDQLEILAGARDWFGPGSRIIITSRDKNVLGKEVRHVHVVKALNFGEALQLFNLNAFKNNVIDKEFALLSRKVVLYAKGLPLALKILGSFLYGKSKSEWESQLEKLKRLPDMKIQNVLKLSYDGLDFQERNIFLDIACFFKGRKVEDIKNLLDACDYATTIGLRTLEDKALLTILDEKVSMHDLIQEMAWEIVREESMEEPGKRSRLWDFNDVYEVLKYNVGTESIKGIALDLSKIDDLPLSPEVFSKMRKLKFLIFYNFGSEEFRMYLPQDLRCLPNELRLLHWDNFPLKSLPPTFSAEKLVSFEMRNSQVRILWHGKQNLVNLRKIDLTDCYNLIELPDFSKASNLKQVYLSKCTSLRDLHPSILSLHKLEILALDWCEALTSLRSDTPLRSLRDLSLYDCSRLKVFSVTSHNMRHLNLAGTAVSELPSSITSQGRLETFSLIDGRSLDTPSKSGDLISLGELHTGDNYMHLDASNLRFLYDGLRSLEALPRETSMFSSLEVLLIVGTELRNLPASIKHLLRLRYIRFDSCKRLQSLPDLPSSLEQLIAIDCPSLETLNFSSTTSQLLKANKISFDFQNCAKLDEHSFKLFGSNVMAEIIKSVPAIEKCSFSNGKVEVIYPGSRVPEWFLHKTTQASVTIDLSSALDCSENWGFIFCIIVPEAPSIEWIRIECGACLEISRGEWEETHEFYSLSAKHVNFSSDHVFLYYDENFCSEIHETLKESVGDVQNNVRKPKVSFNFWVHFGGGDIHEKQEGCLDIIGCGVCSTYASEYRDFIEKMNLQLQSKTDAIEMGHGSSHENEQKQKSEEGVVFPYLARGTWKHGTKGLKDFFA 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3584 1135 Pfam TIR domain 10 185 IPR000157 GO:0007165
Prci2g3584 1135 Pfam NB-ARC domain 199 409 IPR002182 GO:0043531
Prci2g3584 1135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 871 IPR044974 GO:0006952
Prci2g3584 1135 Gene3D - 7 180 IPR035897 -
Prci2g3584 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 436 IPR027417 -
Prci2g3584 1135 Gene3D - 187 341 IPR027417 -
Prci2g3584 1135 Gene3D Ribonuclease Inhibitor 711 1007 IPR032675 -
Prci2g3584 1135 SUPERFAMILY "Winged helix" DNA-binding domain 413 518 IPR036390 -
Prci2g3584 1135 SMART till_3 10 148 IPR000157 GO:0007165
Prci2g3584 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 176 - -
Prci2g3584 1135 Pfam C-JID domain 922 1074 IPR045344 -
Prci2g3584 1135 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 151 IPR035897 -
Prci2g3584 1135 ProSiteProfiles TIR domain profile. 9 174 IPR000157 GO:0007165
Prci2g3584 1135 SUPERFAMILY L domain-like 499 862 - -
Prci2g3584 1135 FunFam Disease resistance protein RPS4 523 714 - -
Prci2g3584 1135 Gene3D Ribonuclease Inhibitor 523 710 IPR032675 -
Prci2g3584 1135 Gene3D - 342 426 IPR042197 -
Prci2g3584 1135 PRINTS Disease resistance protein signature 285 299 - -
Prci2g3584 1135 PRINTS Disease resistance protein signature 209 224 - -
Prci2g3584 1135 PRINTS Disease resistance protein signature 620 636 - -
Prci2g3584 1135 PRINTS Disease resistance protein signature 377 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3584 Prci-Chr2 45814190 45818273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3584 7 835 WRKY Transcription Factor Family AT4G12020 33.967 6.50e-116 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3584 - - ccaj:109805840 1015.37