Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3555 ATGAAGTATCATGTTTTCTTGAGTTTCAGAGGCACCGACACTCGCACCAACTTCACTGATCACTTGTACGCTGCTTTGTGTCGACAAGGGATTGAAACTTTCAGGGATGATGTAGATCTTCACAAAGGACAAGTTATTAAGGACGAACTCCTTCAAGCTATTGAGCAATCTATGTTTGCGATTGTTGTGCTCTCCAAGAATTATGCTTCTTCCTCTTGGTGTTTGGATGAATTGCAGAAGATCGTGGAATCCAAAAAGGACTCCAGTGAAACAGTTTTTCCAGTTTTTTATGGCATAGATCCATCTGATGTACGACATCAAAAACGAAAATTTGCTAAAGCTGTTGAGACCTATGAAAATGATTTTCGAGCTGATGATAGAGTACGAAGATGGAGAGAAGCTTTAACAAAGATTGCTAATTTATCTGGCTGGGATACAAGAAAGAAACAAGAGGCAGGAATTGTTGAAGACATTGTGGAATCTGTGTGGAACAAATTACGTTTGAAATTGCCTGGGAATTTCAAACATTTAGTTGGAGACATTCAATCAAAGGTGGATAAAATCATCTCCCTTTTAAAAATAGGATTGGATGATAAACGCTTCGTAGGGATATGGGGAATGGGCGGTATAGGCAAAACCACTCTCAGTCGAGTTGTTTATGATGCACTTCGAAGCAAGTTTGAGGCCAGCTATTTTTTTGCTAATGTAAGGGAGGATTGTGAAAAGAATGGCTTTGTTTACTTACAAACGAAGCTTCTTTCAGGCCTTGCACAAAAGGAAAAAAAAATAGATAATGCGGATGATGGAGTAGAGCAAATAAGATTTTTTTTACGCCATAAAAAGGTTTTTATTGTTCTTGATGATATCAGCCATGGAAACCAACTAGACAAATTGGCTGAAAGTGAAGAGTGGTTTGGTGAAGGGAGCAAAATCATAATAACTACTAGAGATAAACAATTGTTGACACAATACAAACAGTTTGAAGAGTATGGTGTTGGAGAGTTGAATGAAGATGATTCCCTTAAGCTTTTATGCCAGAAAGCATTTAAAAAGGATGAGCCTGAGGAAGGTTATTTGGATTTGTCAAAAGAAGTAGTTAAATATGCTTGTGGTCTCCCTTTGGCTCTGAAAGTCTTGGGGTCATTTCTTTGCAAAAGAGATCAAGTTCAATGGAGAGATGCATTAGACAAGTTGAAGCAAAACTTACATGAGGATATCTCTAGTAATCTTCTTATCAGTTATGAAGGATTGGCAGATGAAGAGTACAAAAATATATTTTTAGATATTGCATGTTTCTTCGTCGAAAGAAGGAAGGCTGAAGTGAAAGATATATTACAAGTATGCGGTCTTCATTCAGTAATTGGAATTGATGTTCTGATTGAAAAATCATTGTTAAGTACCTTCCAATTAGATATTGAAAATGGTTGGATTCATTTCACCGATGTACGTCAATATATGGATGATGGGCTTCGAAAGATGAGAAGGGAAATTTTCATGAGCGATTACCTCCAGCTTGAATATTTTCCACAAGATCATCTTGCAATGCACGATTTGCTTCAAGAGATGGGAAGGAATATTGTTTTGAAGGAATCAAAAAGTGATCCCTGTAAACGTAGCAGATTGTGGTGTCTAGAGGAGATTGATCACATGTTGAAAAGAAATAAGGGAACGAAAAAAGTAAAAAGCATATGTTTGAATATAGCAAAAATATTTGAAGCAGAGTGGCACCCAGATTGCTTTTCGAAGATGGAAAATCTTAGACTTTTGGACTTGAGCGGTGTTTGTCTTTCACGGAATCTCAATGTTCTTCCCAGTTCATTAAAATTTCTCAGATGGAATTGTTATGCTTTGAAATCTCTACCATCGATTGATCAGCTGTGTGAACTCGAAAGCCTTGAGTTGTGTTCCAGCAAAATAGAAAGATTATGGATTGGAGCACCGCATTTAGATAAGTTGAGGATCATCAATTTGGCTGATTCTCATGATCTAATAGAAACTCCAGATTTCAGTGCAACCCCAAACCTTGAGAAGTTGTTCCTTGATGACTGCCCTAAGTTATTTCGTGTTCATGAATCTATGGGACAACTGAAGAAACTAGTTGAGTTGAGTTTGCGAGATTGTTATAATCTTGTTACGCTTCCAAGTTGCCTGGAAATGAATAATCTGGAGGTGCTTAGTCTCAGAGGAAGCTGGAAGCTTGAGAAGCTCCCAGAGCTTGGGAAAAATATGACAAGGCTATACTTGTTAGATGTGAATAGAACGTCAATCACAGAAATTCCTTCGTCCATTATTCATTTAATAAATCTCAAATATTTGGATTTGTACCATTGCAGAGAACTTAAGGAAGTTCCCGAGCTTCCTCCAAATTTAATTATAGAAGCGACTGGTTGTCATTTGTTGGAACCCAAAGAAGCAGTTGCAAAATACCTCCATCGATCACGTGTATCTAAGGGTCCCATTCACCTTTTCTATAATTACTTTTACCCAATGGAATTCCCCTGGAGAGGAGGAATTCCTGAATGGTTTGAAGGAGAGGAACATTGTCGGAGTAGAGAGAGTAGTTCAAGTGAAGAAGTGGAAGTGGTAACCATAACGGCAGACATACCTTGTGACATGGCTGATTCTAGTAATGGAGAATGTTGGGGAATTGCTGTAGCCCTTGCTTTCCAATCCAATGCTGATAATGAGAATTATAATATTTCAGTGAATTGGAAGTTTGAAGATTATTGTCATACCAATAAAAGAAATGCCACTAATAATGATGATGATGATGATGATCATGTTCATCGAGCATATGTGGGATACTATCCATTTAAGAAGGAGAACTGTAGACCACATCCAAGTGGTGTAGGCACCCAACTTCATTTGACACTTTCTTTCCCGGCCAATCCTGCTGCTAAATTGGGATATTTCACAAACTGGGAAATAGTGGACTGTAGATGGCGTCTGACATGTCAGAAACATTTTGATGAAGGGAGATGA 2982 0.3796 MKYHVFLSFRGTDTRTNFTDHLYAALCRQGIETFRDDVDLHKGQVIKDELLQAIEQSMFAIVVLSKNYASSSWCLDELQKIVESKKDSSETVFPVFYGIDPSDVRHQKRKFAKAVETYENDFRADDRVRRWREALTKIANLSGWDTRKKQEAGIVEDIVESVWNKLRLKLPGNFKHLVGDIQSKVDKIISLLKIGLDDKRFVGIWGMGGIGKTTLSRVVYDALRSKFEASYFFANVREDCEKNGFVYLQTKLLSGLAQKEKKIDNADDGVEQIRFFLRHKKVFIVLDDISHGNQLDKLAESEEWFGEGSKIIITTRDKQLLTQYKQFEEYGVGELNEDDSLKLLCQKAFKKDEPEEGYLDLSKEVVKYACGLPLALKVLGSFLCKRDQVQWRDALDKLKQNLHEDISSNLLISYEGLADEEYKNIFLDIACFFVERRKAEVKDILQVCGLHSVIGIDVLIEKSLLSTFQLDIENGWIHFTDVRQYMDDGLRKMRREIFMSDYLQLEYFPQDHLAMHDLLQEMGRNIVLKESKSDPCKRSRLWCLEEIDHMLKRNKGTKKVKSICLNIAKIFEAEWHPDCFSKMENLRLLDLSGVCLSRNLNVLPSSLKFLRWNCYALKSLPSIDQLCELESLELCSSKIERLWIGAPHLDKLRIINLADSHDLIETPDFSATPNLEKLFLDDCPKLFRVHESMGQLKKLVELSLRDCYNLVTLPSCLEMNNLEVLSLRGSWKLEKLPELGKNMTRLYLLDVNRTSITEIPSSIIHLINLKYLDLYHCRELKEVPELPPNLIIEATGCHLLEPKEAVAKYLHRSRVSKGPIHLFYNYFYPMEFPWRGGIPEWFEGEEHCRSRESSSSEEVEVVTITADIPCDMADSSNGECWGIAVALAFQSNADNENYNISVNWKFEDYCHTNKRNATNNDDDDDDHVHRAYVGYYPFKKENCRPHPSGVGTQLHLTLSFPANPAAKLGYFTNWEIVDCRWRLTCQKHFDEGR 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3555 993 ProSiteProfiles TIR domain profile. 1 170 IPR000157 GO:0007165
Prci2g3555 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 144 IPR035897 -
Prci2g3555 993 Gene3D Ribonuclease Inhibitor 558 719 IPR032675 -
Prci2g3555 993 Gene3D Ribonuclease Inhibitor 720 798 IPR032675 -
Prci2g3555 993 Pfam TIR domain 2 171 IPR000157 GO:0007165
Prci2g3555 993 Gene3D - 334 418 IPR042197 -
Prci2g3555 993 Pfam NB-ARC domain 182 410 IPR002182 GO:0043531
Prci2g3555 993 SUPERFAMILY "Winged helix" DNA-binding domain 412 552 IPR036390 -
Prci2g3555 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 797 IPR044974 GO:0006952
Prci2g3555 993 SMART till_3 2 141 IPR000157 GO:0007165
Prci2g3555 993 PRINTS Disease resistance protein signature 201 216 - -
Prci2g3555 993 PRINTS Disease resistance protein signature 369 383 - -
Prci2g3555 993 PRINTS Disease resistance protein signature 764 780 - -
Prci2g3555 993 PRINTS Disease resistance protein signature 276 290 - -
Prci2g3555 993 Gene3D - 166 329 IPR027417 -
Prci2g3555 993 FunFam Disease resistance protein (TIR-NBS-LRR class) 336 418 - -
Prci2g3555 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 429 IPR027417 -
Prci2g3555 993 SUPERFAMILY L domain-like 565 791 - -
Prci2g3555 993 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 168 - -
Prci2g3555 993 Gene3D - 1 165 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3555 Prci-Chr2 45523109 45529978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3555 3 784 WRKY Transcription Factor Family AT4G12020 30.386 5.46e-85 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3555 - - pcin:129302222 1521.52