Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3552 ATGGCTTTCGCTGCCACACCCAAGCTCAGCATCGATGAAGTGAAGGCATTGAAGGAGATAGGGAAGAAGCTGGGGAAGAAGGAGTGGGACTTTGGGGTAGATCCCTGCAGCGGAAGAGGTAGATGGAATGTGTCAGATGGTTGGAAAGGCTTTGCCAGCTCTGTCATCTGTGATTGCTCCTTCAATAACAACTCATCTTGTCATGTTGTACGTATATTTTTGAAGGCTCAGAATCTTTCTGGTATTCTTCCACCAGAGTTTTCAAAGCTTCAGCATCTCAAGAGATTGGACCTTAGTCGTAACATCTTGACTGGTTCTGTCCCTCAGCAATGGGCTACCATGCAGTTGGATGAGCTCTCTCTTATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACCTGAGTATTGAAGGAAATCAATTTTCAGGCCCCATTCCTCCAGAGATTGGAAAGTTTGTCAACTTAGAAAAAATCATTCTGTCATCAAATGCATTCACAGGAGAATTGCCGGTGGGGCTTGCAAAGTTGACCAAGTTGATTGATTTGAGGATTAGTGACAATATTTTCTCTGGGATACCAGATTTCATTAGCAAATTGACGTCGATTGAAAAGCTGGGTTGCTCACTTGAGGGACCCATCCCTTCCAGCATTTCTGCCTTGAGAAGATTGAGTGATTTGAGGATAACTGACCTGAAAGGTAGAGGCTCATCTTTCCCATCATTGGGTCACATGAAATCAATAAGGACCCTCATACTGAGGAAATGCTTGATTAAAGGAGAGATCCCCGAGTACATTGGGAAAATGAACAAACTGAAAGTCTTAGACTTGGGTTTCAATGAGTTGACTGGAAGGATACCTGCCTCTTTTGCCCAATTCGATAAAGCAGACTTCATGTACCTCACTGGGAACAAACTAACAGGGACTATACCTAGCTGGGTTCTTGGAAAAAGTACAAATGTTGATGTTTCTGACAATAACTTTAGCTGGGAGAGCTCAAGTCCGGTTGAATGTCCAAGAGGGACTGTAAATTTAGTGGAGAGCTACTCTTTTTCTGTGGATAAACAAAAAAATGTTCACGCATGCTTGAAAAAGGACTTTCCATGCTCTGATTCAGACAGCCAATATTACTCCTTGCACATTAATTGTGGTGGAAAGGAAGCAAATATCAATGGTACTATTTATGAAAGGGACAAAGAACAAAGAGGCGCTTCAATGTTTTACTCTGGTCGGAATTGGGCTCTCAGAAGCACTGGGAACTTCATGGACAATGATATTGAATCTGATCCCTATATTGTGACCAACACATCCAAACTTCTGAGTGCTTCTGCTCCCAGTTCAGAACTGTACACGACAGCTCGTTTGTCTCCCCTTTCTCTCACATACTATGGACTCTGTCTAATGCATGGAAACTACACTATTAAGCTCCACTTTGCAGAGATTATGTTTATCAACGGCAGATCATTTTACAGTCTTGGGAGGCGTGTATTCAATGTCTACATCCAGGGGAAGTTGGTCCTAAAGGATTTTAACATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCAATTGTGAAGATATTCAACGCTACAGTCACAAAACATACTTTGAAAATTCACTTTTACTACGCTGGAAAGGGGACAACTGGCATACCCACAAGAGGAATTTATGGACCTCTGATATCCGCCATATCAGTAGATCCTAATTTTACCCCTCCATCACCGGGGATTGGAAAGAGAACGTTTATTATAGTGGCATTTGCCATATTAGCTGCTTTTCTGCTTCTTCTTCTGATGCTCCTAGGTATCATGAGGTGGGAGGGCTGGCTAGGAGGCAAAGGCTCCGTGTATAAAGTTAAAGTTATAAGCTTTCTTTGCTGACTTTCAAATTTGCACTTCCTCCCAGAGCTCAGAGGTATAGATCTGCAGACAGGATTATCATTAAGACAAATCAAAACAGCAACCAAAAACTTCGGTGCTGCTAACAAAATTGGAGAAGGCGGCTTTGGTTCTGTTTTCAAGGGTCTACTATCCGATGGCACTGTGATTGCAGTGAAGCAACTTTCCTCAAAATCTAAGCAAGGAAACCGTGAGTTTGTGAATGAGAGAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGCGGAAGGGAACCAGTTGATACTGATATATGAGTACATGGAAAACAACTGTTTATCACGTGCACTTTTTGGAAAAGACCTGGCCTGCAAAGCAAAACTGGACTGGACGACCAGGAAGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACTAGTAATGTGTTGCTAGATAAAGATTTTAGTGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGATGATAATACCCATATCAGCACTCGAGTCGCAGGAACCATTGGTTACATGGCTCCTGAATATGCAATGCGTGGCTATTTAACTAACAAAGCAGATGTTTATAGTTTTGGGGTTGTTATATTGGAAACTATTAGTGGAAAGAGCAATACAAATTACAGACCAAATGAAGAATTCGTTTACCTTCTTGATTGGGCATATGTTTTGCAAGAGAGAGGAAATCTACTGGAGCTGATTGATCCAGACTTGGGATCAGACTATTCAACTGAGGAGGCCATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCCACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCTGGATACTCTGCAAGTAGTTCCAAGCACAGGTCCATACGAAATCATTTCTGGCAGAACCCAGATACTGATTCCTCTAGTTCATATCTTGGGACTGAGGAAAGCTACCGTCTTGTACAAGTTAACTCATATATCAGGTAA 2988 0.419 MAFAATPKLSIDEVKALKEIGKKLGKKEWDFGVDPCSGRGRWNVSDGWKGFASSVICDCSFNNNSSCHVVRIFLKAQNLSGILPPEFSKLQHLKRLDLSRNILTGSVPQQWATMQLDELSLMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGPIPPEIGKFVNLEKIILSSNAFTGELPVGLAKLTKLIDLRISDNIFSGXIPDFISKLTSIEKLGCSLEGPIPSSISALRRLSDLRITDLKGRGSSFPSLGHMKSIRTLILRKCLIKGEIPEYIGKMNKLKVLDLGFNELTGRIPASFAQFDKADFMYLTGNKLTGTIPSWVLGKSTNVDVSDNNFSWESSSPVECPRGTVNLVESYSFSVDKQKNVHACLKKDFPCSDSDSQYYSLHINCGGKEANINGTIYERDKEQRGASMFYSGRNWALRSTGNFMDNDIESDPYIVTNTSKLLSASAPSSELYTTARLSPLSLTYYGLCLMHGNYTIKLHFAEIMFINGRSFYSLGRRVFNVYIQGKLVLKDFNIEKEAGGTGKPIVKIFNATVTKHTLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFTPPSPGIGKRTFIIVAFAILAAFLLLLLMLLGIMRWEGWLGGKGSVYKVKVISFLCXLSNLHFLPELRGIDLQTGLFXLRQIKTATKNFGAANKIGEGGFGSVFKGLLSDGTVIAVKQLSSKSKQGNREFVNERGMISGLQHPNLVKLYGCCAEGNQLILIYEYMENNCLSRALFGKDLACKAKLDWTTRKKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFSAKVSDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGYLTNKADVYSFGVVILETISGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELIDPDLGSDYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSSYLGTEESYRLVQVNSYIR 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3552 997 Pfam Malectin domain 387 572 IPR021720 -
Prci2g3552 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Prci2g3552 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 951 - -
Prci2g3552 997 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3552 997 SUPERFAMILY Protein kinase-like (PK-like) 651 971 IPR011009 -
Prci2g3552 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 975 - -
Prci2g3552 997 Gene3D Ribonuclease Inhibitor 49 216 IPR032675 -
Prci2g3552 997 Gene3D Ribonuclease Inhibitor 217 349 IPR032675 -
Prci2g3552 997 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Prci2g3552 997 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 224 319 - -
Prci2g3552 997 Gene3D Phosphorylase Kinase; domain 1 642 742 - -
Prci2g3552 997 SUPERFAMILY L domain-like 65 321 - -
Prci2g3552 997 Pfam Protein tyrosine and serine/threonine kinase 671 938 IPR001245 GO:0004672|GO:0006468
Prci2g3552 997 Pfam Leucine Rich Repeat 280 300 IPR001611 GO:0005515
Prci2g3552 997 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 15 178 - -
Prci2g3552 997 CDD STKc_IRAK 673 941 - -
Prci2g3552 997 Gene3D - 383 576 - -
Prci2g3552 997 Gene3D Transferase(Phosphotransferase) domain 1 743 951 - -
Prci2g3552 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 742 - -
Prci2g3552 997 SMART serkin_6 667 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3552 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 385 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3552 Prci-Chr2 45490787 45502850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3552 191 991 Receptor kinase-like Gene Family AT1G07650 61.679 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g3552 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3552 - - gmx:100784864 1492.63