Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3527 ATGGCTGCTCCAGGTCCTTCCACTGCCTCAACTTCTCCGATGAGATATCATGTTTTCTTGAGTTTCAGAGGCACCGATACTCGCACCAACTTCACCGATCACTTGTATGCTGCTTTGCTTCGACAAGGAATTGTAACTTTCAGGGATGATGTAGATCTTCACAAAGGACATGTTATTAAGGACGAACTCCTCCAAGCTATTGAGCAATCCATGTTTGCCATTGTTGTGCTCTCCAAGAATTATGCTGCTTCTTCTTGGTGTTTGGATGAACTGCGGAAGATCCTAAAATCCAAAAAGGCCTCCGGTCAAACAGTTTTTCCAGTTTTTTATGGCATAGATCCATCTGATGTTCGACATCAAAAAAGAAAATTTGCAACAGCTTTTGAGAAGCATGAAGTTAGATTTCCAGATGTTAAAGTGCGAAGATGGAGAAAAGCTTTAAGAAAGATTGCCAAATTATCTGGCTGGGATACGAGTAATAAACATGAGGCGGAAATTGTTGAAGACATTGTGAAATCTGTCTGGAACAAATTATGTCTGAAATTGCCATCTAATTTTGGACATTTAGTTGGAGACATTCAATCAAAGGTGGATAGAATTATCTCCCTTTTAAAGATAGGATTGGGTGATAAATGCTTCGTAGGGATATGGGGAATGGGCGGTATAGGCAAAACCACTCTTAGTCGAGTTGTTTATGATGCACTTCAAAGCAAGTTTGAGGCTAGCTGTTTTCTTGCTAATTTAAGGGAGGATTGTGAAAAGAGTGGCTTAGTTTACTTACAAAAAAAGCTTCTTTCAGGCCTTGGACTAAGAGAACCAAAAATAGATGATGCCTATGATGGAGTAAAGAAAATAAGAGGTTTCTTGTGCCATAAAAAGGTTCTTATTGTTCTTGATGACATCAGCCATAAAAGCCAACTGGACAATTTGGCTGGAACTGAAGAGTGGTTTGGTGAAGGGAGCAAAATCATAATGACTACTAGAGATAAACAATTGTTGACACAATATGAACAGTTTGAAGAGTATGGTGTTGGAAAGTTGAATGAAGATGAATCCCTTAAGCTTTTATGCCATAAAGCATTTAAAAAGGATGAGCCTAAGGAAGCTTATTTGGATTTTTCGAAAGAAGTAGTTAAATATGCTTGCGGACTCCCTTTGGCTCTTGAAGTCTTGGGGTCATTTCTTTGCAATAGAGATCCAGTTCAATGGAGAGACGCATTAGACAAGTTGAAGGAAAATTTACATAAGGATATCTTTAGCAAACTTTGCATCAGTTATGAAGGATTAGAAGATGAACAGTACAGAAATATATTTTTAGATATTGCATGTTTGTTCATTCGAACATCGAAGGCTGAAGTGACAGATATATTAAAAATATGTGGTCTTCATTCAGTAATTGGAATTAATGTTCTGATTGAGAAATCATTGTTAAGTACCTTCAAATCACAAAGTTTGGGGAATAATTGGGGTTCATATTGCAATGTACATCAATATATGGATGATGGGCTTCGAAAGATGAGAAGGGAAATTTTCATAGACCGAGAACAGCTTGAATATTATTATCCACAAGATCATCTTACAATGCACGATTTGCTTCAAGAGATGGGAAGGAATATTGTTTTGCGAGAATCAAGTGATGCCTGTAAACGTAGCAGATTGTGGCGTCTAGAGGAGATTGATCACATGTTGAAAAGAAATAAGGGAACGAAAAAAGTTCAAAGCATATGTTTGAATATAGCTCAAAAATTTAAAGCGGAGTGGCACCCAGATTGCTTTTTGAAGATGGAAAATCTTAGACTTTTGGACTTGAGTGGTGTTTGTCTTTCACGGAATCTCAATGTTCTTCCTAGTTCATTAAAATTTCTCAGATGGGATTTTTACGCTCTGAAATCTCTACCATCAATTGATCAGTTGTGTGAACTTGAAAGCCTTGAGTTGCGTTCTAGCAAAATAGAAAGATTATGGAATGGAGCGCCGCGTTTAGATAAGCTAAGGATCATCAATTTGGCTGAATCTGGAGATCTAATAGAAACTCCGGATTTTAGTGCAACCCCAAACCTTGAGAAGTTATTCCTTGATGACTGCCATAATTTAGTTGGTGTTCATGAATCTATTGGACAACTGAAGAAACTAGTTGAGTTGAGTTTGGAAGACTGTGTAAATCTTGTTAAACTTCCAAGTTGTCTGGAAATGAATAATCTGGAGGTGCTTAATCTTAGAGGATGCAAAAAGCTTGAGAAGCTTCCAGAGTTTGGGAAGAATATGACAAGTCTATACTTGTTAAGTGGGTGGGGAGCATCAATCACAGAAATTCCTTTGTCAATTATTCATTTAATAAATCTCAAATTTTTGGATTTGTACGAATGCGACAAGCTTAAGAAAGTTCCCGAGCTTCCTCCAAATTTAATTATAGCAGCGACTCATTGTGATTTGTTGGAACCCAAAGAAGCAGTTGCAAAATACCTCTCGGGATCACGTGTATCTAAGTGTTTTGCAGGGTCCCATTCACATTTTTTATGA 2520 0.3746 MAAPGPSTASTSPMRYHVFLSFRGTDTRTNFTDHLYAALLRQGIVTFRDDVDLHKGHVIKDELLQAIEQSMFAIVVLSKNYAASSWCLDELRKILKSKKASGQTVFPVFYGIDPSDVRHQKRKFATAFEKHEVRFPDVKVRRWRKALRKIAKLSGWDTSNKHEAEIVEDIVKSVWNKLCLKLPSNFGHLVGDIQSKVDRIISLLKIGLGDKCFVGIWGMGGIGKTTLSRVVYDALQSKFEASCFLANLREDCEKSGLVYLQKKLLSGLGLREPKIDDAYDGVKKIRGFLCHKKVLIVLDDISHKSQLDNLAGTEEWFGEGSKIIMTTRDKQLLTQYEQFEEYGVGKLNEDESLKLLCHKAFKKDEPKEAYLDFSKEVVKYACGLPLALEVLGSFLCNRDPVQWRDALDKLKENLHKDIFSKLCISYEGLEDEQYRNIFLDIACLFIRTSKAEVTDILKICGLHSVIGINVLIEKSLLSTFKSQSLGNNWGSYCNVHQYMDDGLRKMRREIFIDREQLEYYYPQDHLTMHDLLQEMGRNIVLRESSDACKRSRLWRLEEIDHMLKRNKGTKKVQSICLNIAQKFKAEWHPDCFLKMENLRLLDLSGVCLSRNLNVLPSSLKFLRWDFYALKSLPSIDQLCELESLELRSSKIERLWNGAPRLDKLRIINLAESGDLIETPDFSATPNLEKLFLDDCHNLVGVHESIGQLKKLVELSLEDCVNLVKLPSCLEMNNLEVLNLRGCKKLEKLPEFGKNMTSLYLLSGWGASITEIPLSIIHLINLKFLDLYECDKLKKVPELPPNLIIAATHCDLLEPKEAVAKYLSGSRVSKCFAGSHSHFL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3527 839 SMART till_3 15 153 IPR000157 GO:0007165
Prci2g3527 839 Pfam TIR domain 16 184 IPR000157 GO:0007165
Prci2g3527 839 PRINTS Disease resistance protein signature 213 228 - -
Prci2g3527 839 PRINTS Disease resistance protein signature 381 395 - -
Prci2g3527 839 PRINTS Disease resistance protein signature 288 302 - -
Prci2g3527 839 PRINTS Disease resistance protein signature 729 745 - -
Prci2g3527 839 Gene3D - 346 430 IPR042197 -
Prci2g3527 839 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 180 - -
Prci2g3527 839 ProSiteProfiles TIR domain profile. 14 178 IPR000157 GO:0007165
Prci2g3527 839 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 803 IPR044974 GO:0006952
Prci2g3527 839 Gene3D Ribonuclease Inhibitor 576 730 IPR032675 -
Prci2g3527 839 Gene3D Ribonuclease Inhibitor 731 809 IPR032675 -
Prci2g3527 839 SUPERFAMILY L domain-like 583 803 - -
Prci2g3527 839 Gene3D - 180 341 IPR027417 -
Prci2g3527 839 Gene3D - 13 179 IPR035897 -
Prci2g3527 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 441 IPR027417 -
Prci2g3527 839 Pfam NB-ARC domain 195 416 IPR002182 GO:0043531
Prci2g3527 839 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3527 Prci-Chr2 45219092 45224689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3527 6 796 WRKY Transcription Factor Family AT4G12020 30.864 1.40e-90 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3527 - - pcin:129302222 1658.27