Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3518 ATGAAGTATCATGTTTTCTTGAGTTTCAGAGGCACCGACACTCGCACCAACTTCACTGATCACTTGTACGCTGCTTTGTGTCGACAAGGGATTGAAACTTTCAAGGATGATAAAGATCTTCACAAAGGAGAAGTTATTTCCGAGGAACTTCTCCAAGCTATTGAGCAATCCATGTTTGCGATTGTTGTGCTCTCCAAGAATTATGCTTCTTCCCGTTGGTGTTTGGATGAACTGCAGAAGATCCTAGAATCCAAAAAGGACTCCAGTGAAACAATTTTCCCAGTTTTTTATCACGTAACTCCAACTGATGTTCGGCATCAAAAAAGAAAATTTGCTACAGCTTTTGATACCCATGAAGTTAGATTTCCATATGAAGTTCCAAGATGGAGAGAAGCTTTAACGCAGATTGCTAATTTCTCTGGTTGGCATATAAAAAAGGATAAACCTGAGGCGAAAATTGTTGAAGACATTGTGAAATATGTGTGGTACAAATTATGTTTGAAGTTGCCATCAAATTTTGAACATTTAGTTGGAGACATTCAATCAAAGGTGGATAGAATCATCTCCCTTTTAAAGATAGGATTGGATGATAAATGCTTCATTGGGATATGGGGAATGGGCGGTATAGGCAAAACCACTCTTAGTCGAGTTGTTTATGATGCACTTCGAAGCAAGTTTGAGGCTAGCTATTTTTTTGCTAATGTAAGGGAGGATTGTGAAAAGCATGGCTTTGTTTACTTACAAAAGAAGCTTCTTTCAGGCCTTGGACGAATAGAACCAGAAATAAAAAATGCCCATGATGGAGCAAAGGAAATAAGATTTTTTTTATGCCATAAAAAGGTTCTCATTGTTCTCGATGATATCAGCCATGGAAACCAACTGGACAAATTGGCTGAAAGTGAAGAGTGGTTTGGTGAAGGGAGCAAAATCATAATAACTACTAGAGATAAACAATTGTTGACACAATACAAACAGTTTGAAGAGTATGGTGTTGGAGAGTTGAATGAAGATGATTCCCTTAAGGTTTTATGCCGGAAAGCATTTAAAAGGGATGAGCCTGATGAAGGTTATTTGGATTTGTCGAAAGAAGTAGTTAAATATGCTTGTGGACTCCCTTTGGCTCTTGAAGTCTTGGGGCGATTTCTTTGCAAAAGAGATCAAGTTCAATGGAGAGATGCATTAGACAAGTTGAAGCAAACTTTACCTAATGATATCTTTAGTAAACTCTGCATCAGTTATGAAGGATTGGAAGATGAAGAGTACAGAGATATATTTTTAGATATTGCATGTTTCTTCGTCCGAAGAACGAAGGCTGAAGTGAAAGATATATTAAAAGCATGCGGTCTTCATTCAGTAATTGGAATTGATGTTCTGATCGAAAAATCATTGTTAAGTATCGTCCAATTAGATAGTATAGAGAGGTCACATTTTGATTACGATGTACGTCAATATATGGATGATGGGCTTCGAAAGATGAGAAGGGAACTTTTAATCAGCCATTACCGCCAGCTTGAATATTATCCACAAGATCATCTTGCAATGCACGATTTGCTTCAAGAGATGGGAAGGAATATTGTTTTGAAGGAATCAAAAAGTGATCCCTGTAAACGTAGCAGATTGTGGTGTCTAGAGGAGGTTGATTACATGTTGAAAAGAAATAAGGGAACGAAAAAAGTTCAAAGCATATGTTTGAATATAGGAGATTTTAAAGCGGAGTGGCACCCAGATTGCTTTTCGAAGATGGAAAATCTTAGACTTTTGGACTTGAGTGGTGTTCGTCTTTCACAGAATCTCAATGTTCTTCCCAGTTCATTAAATTTTCTCAGATGGAATTATTATGCTCTGAAATCTCTACCGTCGATCGATCAGCTGTATGAACTCGGGATCCTTGAGTTGCGTTTCAGCACAATAGAAAGATTATGGATTGGAGCACCGCGTTTAGATAAGTTGAGGATCATCACTTTGGCTGGTTCTGAAGATCTAATAGAAACTCCAGATTTCAGTGCAACCCCAAACCTTGAGAAGTTGTTCCTTGATTATTGCTTTAAGTTATGTCATGTTCATGAATCTATTGGACAACTGAAGAAACTAGTTGAGTTGAGTTTGGCATATTGTATAAATCTTGCTACGCTTCCAAGTTGCCTGGAAATGAATAATCTGGAGGTGCTTGGTCTTGAAATATGTCGAAGCCTTGAGAAGCTCCCGGAGTTTGGGAAAAATATGACAAGTCTATACTTGTTAGATGTGTCTTATACATCAATCACAGAAATTCCTTCGTCCATTATTCATTTAATAAATCTCAAATATTTGAATTTGGAGAATTGCAGAAAGCTTGAGAAAGTTCCCGAGCTTCCTCCAAATTTAATTATAGAAGCGACTCATTGTGATTTGTTGGAACCCAAAGATGCAGTTGTAAAATACCTCTCCGGATCACCTGTATCTAAGTGTTCTGCAGGATCCCATTCACCTTTTTTATGA 2478 0.3761 MKYHVFLSFRGTDTRTNFTDHLYAALCRQGIETFKDDKDLHKGEVISEELLQAIEQSMFAIVVLSKNYASSRWCLDELQKILESKKDSSETIFPVFYHVTPTDVRHQKRKFATAFDTHEVRFPYEVPRWREALTQIANFSGWHIKKDKPEAKIVEDIVKYVWYKLCLKLPSNFEHLVGDIQSKVDRIISLLKIGLDDKCFIGIWGMGGIGKTTLSRVVYDALRSKFEASYFFANVREDCEKHGFVYLQKKLLSGLGRIEPEIKNAHDGAKEIRFFLCHKKVLIVLDDISHGNQLDKLAESEEWFGEGSKIIITTRDKQLLTQYKQFEEYGVGELNEDDSLKVLCRKAFKRDEPDEGYLDLSKEVVKYACGLPLALEVLGRFLCKRDQVQWRDALDKLKQTLPNDIFSKLCISYEGLEDEEYRDIFLDIACFFVRRTKAEVKDILKACGLHSVIGIDVLIEKSLLSIVQLDSIERSHFDYDVRQYMDDGLRKMRRELLISHYRQLEYYPQDHLAMHDLLQEMGRNIVLKESKSDPCKRSRLWCLEEVDYMLKRNKGTKKVQSICLNIGDFKAEWHPDCFSKMENLRLLDLSGVRLSQNLNVLPSSLNFLRWNYYALKSLPSIDQLYELGILELRFSTIERLWIGAPRLDKLRIITLAGSEDLIETPDFSATPNLEKLFLDYCFKLCHVHESIGQLKKLVELSLAYCINLATLPSCLEMNNLEVLGLEICRSLEKLPEFGKNMTSLYLLDVSYTSITEIPSSIIHLINLKYLNLENCRKLEKVPELPPNLIIEATHCDLLEPKDAVVKYLSGSPVSKCSAGSHSPFL 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3518 825 Gene3D - 166 328 IPR027417 -
Prci2g3518 825 Gene3D - 1 165 IPR035897 -
Prci2g3518 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 793 IPR044974 GO:0006952
Prci2g3518 825 SUPERFAMILY L domain-like 567 789 - -
Prci2g3518 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 428 IPR027417 -
Prci2g3518 825 ProSiteProfiles TIR domain profile. 1 165 IPR000157 GO:0007165
Prci2g3518 825 Pfam NB-ARC domain 181 400 IPR002182 GO:0043531
Prci2g3518 825 Gene3D - 333 417 IPR042197 -
Prci2g3518 825 PRINTS Disease resistance protein signature 275 289 - -
Prci2g3518 825 PRINTS Disease resistance protein signature 200 215 - -
Prci2g3518 825 PRINTS Disease resistance protein signature 762 778 - -
Prci2g3518 825 PRINTS Disease resistance protein signature 368 382 - -
Prci2g3518 825 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 166 - -
Prci2g3518 825 Pfam TIR domain 2 174 IPR000157 GO:0007165
Prci2g3518 825 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 142 IPR035897 -
Prci2g3518 825 Gene3D Ribonuclease Inhibitor 717 796 IPR032675 -
Prci2g3518 825 Gene3D Ribonuclease Inhibitor 558 716 IPR032675 -
Prci2g3518 825 SMART till_3 2 139 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3518 Prci-Chr2 45109261 45115182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3518 647 785 WRKY Transcription Factor Family AT4G12020 32.857 2.88e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3518 - - pcin:129302222 1263.44