Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3510 ATGAAGCTCAATTTGGGATGTCCGAATCTTCTGCTTTCCCTTCTCCTTCTTGCCACCACTTCAGTCTTCATCTTCCTCCCACAAATGGCTTTCGCTGCCACACCCAAGTTCAGCATCGATGAAGTGAAGGCATTGAAGGAGATAGGGAAGAAGCTGGGGAAGAAGGAGGGGGACTTTGGGGTAGATCCCTGCAGCGGAAGAGGTAGATGGAATGTGTCAGATGATTGGAAAGGCTTTGCAAGCTCTGTCATCTGTGATTGCTCCTTCAACAACAACTCATCTTGTTATGTTGTACGCATATTTTTGAAGGCTCAGAATCTTTCTGGTATTCTTCCACCAGAGTTTTCAAAGCTTCAGCATATCAAGAGATTGGACCTTAGTCGTAACATCTTGAGTTCTGTACCTCAGCAATGGGCTACCATGCACTTGGATGAGCTTTATTGTCAATGAATATGCAACTCTCTTATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCGATATCACAACCCTCAGAAACCTGAGTATTGAAGGAAATCTATTTTCAGGCCCCCTTCCTCCAGAGATTGGAAAGTTTGTCAACTTAGAAAAAATCATTCTGTCATCAAATGCATTCACAGGAGAATTGCCGGTGGGGCTTTCAAAGTTGACCAAGTTGATTGATTTGAGGATTAGTGACAATATTTTCTCTGGGAGGATACCAGATTTCATTAGCAAATTGACGTCGATTGAAAAGCTGCATATTGAGGGTTGCTCACTTGAGGGACCCATCCCTTCCAGCATTTCTGCCTTGAGAAGATTAAGTGATTTGAGGATAACTGACCTGAAAGGTAGAGGCTCATCTTTCCCATCATTGGGTCACATGAAATCAATAAGGACCCTCATACTGAGGAAATGCTTAATTAAAGGAGAGATCCCCGAGTACACTGGGAAAATGAACAAACTGAAAGTCTTAGACTTGAGTTTCAATGAGTTGACTGGAAGGATACCTGCCTCTTTTGCCCAATTCGATAAAGCAGACTTCATGTACCTCACTGGGAACAAACTAACAGGGACTATACCTAGCTGGGTTCTTGGAAAAAATACAAATGTTGATGTTTCTGACAATAACTTTAGCTGGGAGAGCTCAAGTCCGGTTGAATGTCCAAGAGGGACTGTAAATTTAGTGGAGAGCTACTCTTTTTCTGTGGATAAACAAAAAAATGTTCACGCATGCTTGAAAAAGGACTTTCCATGCTCTGATTCAGACAGCCAATATTACTCCTTGCACATTAATTGTGGTGGAAAGGAAGCAAATATCAATGGTACTATTTATGAAAGGGACAAAGAACAAAGAGGCGCTTCAATGTTTTACTCTGGTCGGAATTGGGCTCTCAGCAGCACTGGGAACTTCATGGACAATGATATTGAATCTGATCCCTATATTGTGACCAACACATCCAAACTTCTGTGTGTTTCTGCTCCCAGTTCAGAACTGTACACGACAGCTCGTTTGTCTCCCCTTTCTCTCACATACTATGGACTCTGTCTAATGAATGGAAACTACACTATTAAGCTCCACTTTGCAGAGATTATTTTTATCAACTGCAGATCATTTTACAGTCTTGGGAGGCGTGTATTCAATGTCTACATCCAGGGGAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCAATTGTGAAGGTATTCAACGCTACAGTCACAAAACATACTTTGAAAATTCACTTTTACTACGCTGGAAAGGGGACAACTGGCATACCCACAAGAGGAATTTATGGACCTCTGATATCCGCCATATCAGTAGATCCTAATTTTACCCCTCCATCACCGGGGATTGGAAAGAGAACGTTTATTATAGTGGCATTTGCCATATTAGCTGCTCTCCTGCTTCTTCTTCTGATGCTCCTAGGTATCATGAGGTGGGAGGGCTGGCTAGGAGGCAAAGGCTCCGTGTATAAAGAGCTCAGAGGTATAGATCTGCAGACAGGATTATTCACATTAAGACAAATCAAAACAGCAACCAAAAACTTCGATGCTGCTAACAAAATTGGAGAAGGCGGCTTTGGTTCTGTTTTCAAGGGTCTACTATCCGATGGCACTGTGATTGCAGTGAAGCAACTTTCCTCAAAATCTAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGCGGAAGGGAACCAGTTGATACTGATATATGAGTATATGGAAAACAACTGTTTATCACGTGCACTTTTTGGAAAAGACCCGGCCTGCAAAGCAAAACTGGACTGGACGACCAGGAAGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACTAGTAATGTGTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGATGATAATACCCATATCAGCACTCGAGTCGCAGGAACCATTGGTTACATGGCTCCTGAATATGCAATGTGTGGCTATTTAACTGACAAAGCATATGTTTATAGTTTTGGGGTTGTTATATTGGAAACTATTAGTGGAAAGAGCAATACAAATTACAGACCAAATGAAGAATTCGTTTACCTTCTTGATTGGGCATATGTTTTGCAAGAGAGAGGAAATCTACTGGAGCTGATTGATCCAGACTTGGCATCAGACTATTCAACTGAGGAGGCCATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCCACGCTCAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCTGGATACTCTGCAAGTAGTTCCAAGCACAGGTCCATACGAAATCATTTCTGGCAGAACCCAGATACTGATTCCTCTAGTTCATATCTTGGGACTGAGGAAAGCTACCGTCTTGTACAAGTTAACTCATATATCAGGTAA 3054 0.4178 MKLNLGCPNLLLSLLLLATTSVFIFLPQMAFAATPKFSIDEVKALKEIGKKLGKKEGDFGVDPCSGRGRWNVSDDWKGFASSVICDCSFNNNSSCYVVRIFLKAQNLSGILPPEFSKLQHIKRLDLSRNILTXSVPQQWATMHLDELYCQXICNSLMGNKLSGPFPKVLTDITTLRNLSIEGNLFSGPLPPEIGKFVNLEKIILSSNAFTGELPVGLSKLTKLIDLRISDNIFSGRIPDFISKLTSIEKLHIEGCSLEGPIPSSISALRRLSDLRITDLKGRGSSFPSLGHMKSIRTLILRKCLIKGEIPEYTGKMNKLKVLDLSFNELTGRIPASFAQFDKADFMYLTGNKLTGTIPSWVLGKNTNVDVSDNNFSWESSSPVECPRGTVNLVESYSFSVDKQKNVHACLKKDFPCSDSDSQYYSLHINCGGKEANINGTIYERDKEQRGASMFYSGRNWALSSTGNFMDNDIESDPYIVTNTSKLLCVSAPSSELYTTARLSPLSLTYYGLCLMNGNYTIKLHFAEIIFINCRSFYSLGRRVFNVYIQGKLVLKDFNIEKEAGGTGKPIVKVFNATVTKHTLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFTPPSPGIGKRTFIIVAFAILAALLLLLLMLLGIMRWEGWLGGKGSVYKELRGIDLQTGLFTLRQIKTATKNFDAANKIGEGGFGSVFKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCAEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTTRKKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMCGYLTDKAYVYSFGVVILETISGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELIDPDLASDYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSSYLGTEESYRLVQVNSYIR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3510 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 996 - -
Prci2g3510 1018 CDD STKc_IRAK 694 962 - -
Prci2g3510 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase 764 972 - -
Prci2g3510 1018 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Prci2g3510 1018 SMART serkin_6 688 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3510 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 244 391 - -
Prci2g3510 1018 Gene3D Phosphorylase Kinase; domain 1 658 763 - -
Prci2g3510 1018 Gene3D Ribonuclease Inhibitor 269 393 IPR032675 -
Prci2g3510 1018 SUPERFAMILY L domain-like 91 372 - -
Prci2g3510 1018 Gene3D Transferase(Phosphotransferase) domain 1 764 972 - -
Prci2g3510 1018 Gene3D Ribonuclease Inhibitor 203 268 IPR032675 -
Prci2g3510 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Prci2g3510 1018 Gene3D - 421 614 - -
Prci2g3510 1018 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 658 763 - -
Prci2g3510 1018 Gene3D Ribonuclease Inhibitor 41 202 IPR032675 -
Prci2g3510 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 423 615 - -
Prci2g3510 1018 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 213 - -
Prci2g3510 1018 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Prci2g3510 1018 Pfam Leucine Rich Repeat 318 338 IPR001611 GO:0005515
Prci2g3510 1018 SUPERFAMILY Protein kinase-like (PK-like) 673 962 IPR011009 -
Prci2g3510 1018 Pfam Malectin domain 425 610 IPR021720 -
Prci2g3510 1018 ProSiteProfiles Protein kinase domain profile. 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3510 Prci-Chr2 45067217 45079405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3510 226 1011 Receptor kinase-like Gene Family AT1G07650 63.806 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g3510 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3510 - - gmx:100784864 1516.13