Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g3499 ATGGCGAGGGTTTCTTTAAGGTTGATTTCCTTTCTCTTCCTTCTCCTCAACATAGCCTTAACATTTCATCATGGCACAACTAATGCACAGCCAAGCTTCTTAAAATTCTACTGCGGTAACGACTCCACTGAAAGCAATAGTACCTACCAGATCAACCTCAAAGGCCTTTTGTTAAACATGTCTCTCAACACGCAAATCGACTATGGCTTCTACAACTTCTCCTCCGGCGAAAACTCCGACAAAGTTAACGCCCTCGTGTTATGCCGGGGAGATGTTTCTGTACAAGATTGTCGGAGCTGTATCACAGATTCAAGAGCTGTTCTTCCTCAAGTGTGCCCGAACATGAATGAGGCGATCGGCTGGTACGACAACTGCATGCTGAGATACTCCAATCGAACCATATTCGGCGTCATGGAAACGTTGCCACATCACTATTTGTGGAACACCGAGGATGCGCCGGAGAAAGACCAGTTCAAGATCGTGGTGACGCAGATGATGAATGCTTTGAGAGAAAAGGCTGCTTCTGGAAACTCGGTTCGTAAGTTTGCGGTGGCGAATGCGACCGGTCCGAGCAATGAAACGATATATGGTCTGGCACAGTGCACGCCGGACTTGTCGGAAAACGATTGCAACGTTTGCTTGAATGGGGCAATCACTAATGATCTTCCTAAATGTTGTGGTGGACACAAAGGTGGTAGAGTGTTAACACCAAGTTGCAACATTAGATATGAATCGTACAGTTTCTTTGATCCCTCTGCTACACCACAATTATCTTTGCCAGCACCACCGTTGCCATCCCCCAGGCCCACGTCACTACCTCCTACGGCTGCCCCATTGGCTCATCCCGCGTCCAAGCAAGGAAAGTGCAGCACCTCACGAATTGTTATCGCCGTTGTTGTCCTCGTTGCCTGCATCGAAGCGCTCATCCTTATTATCGTCTTAATTTCTTTAAAATTAAGGAGGCCAAAGAATATTGAAAGTGAAGCTAAGGATGTCGCTGACTCATTGCAAATGGACTTTGAAACCATTAGAATCGCAACAAATGATTTTTCTGAAGCAAATAAGCTTGGACAAGGTGGATTTGGACCTGTTTACTTGGGCACGTTATATAATGGACAAGAAATTGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGATGTGGAGTTTAAGAATGAAGTATTGTTAATGGCCAAAGTGCAACATCGGAATTTAGTCAGGCTACTTGGTTTTTGTCTCCAAAATAGGCTGCTTGTTTATGAGTTTGTTCCAAACAAGAGCCTTGATTACTTCATCTTTGATCCACAAAAGGCAACATTGTTGAAATGGGAAAATCGTTACAAAATAATAGAAAGTATTGCACGAGGTTTGCTTTACCTTCATCAAGATTCTCGAGTTCGGATTGTTCATCGTGATCTCAAAGCAAGCAATATACTTTTAGATGAAGAAATGAATGCTAAAATATCAGATTTTGGCATGGCAAGATTATTTTTAATGGATCAAACCCATGGCAAGACTAATACAGTTGTTGGTACCTATGGATATATGTCACCAGAATATCTAAAACATGGAACTTTTTCAATGAAGTCAGATGTGTTCAGTTTTGGAGTATTGGTTTTGGAAATTATTAGTGGGAAGAAAAATGGTAAATTTGAAGATTGGGAGAATCCAGAGCATATAGGAATTGCTGCTTGGAAAAAGTGGAGAGAAGGGAAATTATCAAGTATTATAGATCCACTATTGATGGAGGAAGGTGAATCATCAAGAAGTGAAATAATAAGATGCATCCATGTAGGGTTACTATGTGTTCAAGAAAAAGCAAGCGACAGGCCCACAATGGATTCCATTGTAGCAATGCTGAGTAGCTATTCACTCTCACTGCCCACTCCTCTCCAGCCTTCCTTTTATAGTTGGAACAGCTTACCAGGCTTCTCATCTTCATCATCGTCTGGAGAACATCATTCTGTTGAAACATCTAGAAATGAAGTTTCAGTTTCAGACCAACATAATAATGCCTAG 2022 0.4209 MARVSLRLISFLFLLLNIALTFHHGTTNAQPSFLKFYCGNDSTESNSTYQINLKGLLLNMSLNTQIDYGFYNFSSGENSDKVNALVLCRGDVSVQDCRSCITDSRAVLPQVCPNMNEAIGWYDNCMLRYSNRTIFGVMETLPHHYLWNTEDAPEKDQFKIVVTQMMNALREKAASGNSVRKFAVANATGPSNETIYGLAQCTPDLSENDCNVCLNGAITNDLPKCCGGHKGGRVLTPSCNIRYESYSFFDPSATPQLSLPAPPLPSPRPTSLPPTAAPLAHPASKQGKCSTSRIVIAVVVLVACIEALILIIVLISLKLRRPKNIESEAKDVADSLQMDFETIRIATNDFSEANKLGQGGFGPVYLGTLYNGQEIAVKRLSRDSGQGDVEFKNEVLLMAKVQHRNLVRLLGFCLQNRLLVYEFVPNKSLDYFIFDPQKATLLKWENRYKIIESIARGLLYLHQDSRVRIVHRDLKASNILLDEEMNAKISDFGMARLFLMDQTHGKTNTVVGTYGYMSPEYLKHGTFSMKSDVFSFGVLVLEIISGKKNGKFEDWENPEHIGIAAWKKWREGKLSSIIDPLLMEEGESSRSEIIRCIHVGLLCVQEKASDRPTMDSIVAMLSSYSLSLPTPLQPSFYSWNSLPGFSSSSSSGEHHSVETSRNEVSVSDQHNNA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g3499 673 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Prci2g3499 673 MobiDBLite consensus disorder prediction 257 276 - -
Prci2g3499 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Prci2g3499 673 MobiDBLite consensus disorder prediction 257 279 - -
Prci2g3499 673 SMART serkin_6 350 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3499 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 668 - -
Prci2g3499 673 Gene3D - 30 133 IPR038408 -
Prci2g3499 673 Gene3D - 141 248 IPR038408 -
Prci2g3499 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 134 - -
Prci2g3499 673 Pfam Protein tyrosine and serine/threonine kinase 353 621 IPR001245 GO:0004672|GO:0006468
Prci2g3499 673 FunFam cysteine-rich receptor-like protein kinase 10 424 628 - -
Prci2g3499 673 Gene3D Phosphorylase Kinase; domain 1 315 423 - -
Prci2g3499 673 MobiDBLite consensus disorder prediction 648 673 - -
Prci2g3499 673 Gene3D Transferase(Phosphotransferase) domain 1 424 628 - -
Prci2g3499 673 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Prci2g3499 673 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g3499 673 CDD STKc_IRAK 356 621 - -
Prci2g3499 673 FunFam Cysteine-rich receptor-like protein kinase 10 142 248 - -
Prci2g3499 673 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Prci2g3499 673 Pfam Salt stress response/antifungal 153 246 IPR002902 -
Prci2g3499 673 FunFam Cysteine-rich receptor-like protein kinase 10 316 423 - -
Prci2g3499 673 SUPERFAMILY Protein kinase-like (PK-like) 334 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g3499 Prci-Chr2 44809110 44813564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g3499 6 668 Receptor kinase-like Gene Family AT4G21410 45.428 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci2g3499 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g3499 - - lang:109353867 690.649